RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 C3orf36Q3SXR2 165 aa6.09□□□□□ -1.43
PCM1-219ENST00000523540 ANKRD35Q8N283 1001 aa6.09□□□□□ -1.43
PCM1-219ENST00000523540 MIER2Q8N344 545 aa6.09□□□□□ -1.43
PCM1-219ENST00000523540 SH3RF3Q8TEJ3 882 aaPredicted RBP6.09□□□□□ -1.43
PCM1-219ENST00000523540 CSRNP2Q9H175 543 aa6.09□□□□□ -1.43
PCM1-219ENST00000523540 ST6GALNAC2Q9UJ37 374 aa6.09□□□□□ -1.43
PCM1-219ENST00000523540 ZMYM3Q14202 1370 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 CCDC154A6NI56 674 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 WNT10BO00744 389 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 MUSKO15146 869 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 VCAM1P19320 739 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 MSX2P35548 267 aaPredicted RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 GZMKP49863 264 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 UAP1L1Q3KQV9 507 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 RRP12Q5JTH9 1297 aaKnown RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 PRAMEF14Q5SWL7 426 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 Q6ZSN1 163 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 TRMT2AQ8IZ69 625 aaKnown RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 PQLC1Q8N2U9 271 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 REPS2Q8NFH8 660 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 HDAC10Q969S8 669 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 ZNF512Q96ME7 567 aaPredicted RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 CDC5LQ99459 802 aaKnown RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 C7orf25Q9BPX7 421 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 PNMA8BQ9ULN7 279 aaPredicted RBP6.08□□□□□ -1.44
PCM1-219ENST00000523540 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
PCM1-219ENST00000523540 ATRNL1Q5VV63 1379 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 POU2F2P09086 479 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 HSP90B1P14625 803 aaKnown RBP6.07□□□□□ -1.44
PCM1-219ENST00000523540 AKAP5P24588 427 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 GUCY1A2P33402 732 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 APBA1Q02410 837 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 IL10RAQ13651 578 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 PRKD1Q15139 912 aaPredicted RBP6.07□□□□□ -1.44
PCM1-219ENST00000523540 PPP2R5AQ15172 486 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 FAM214AQ32MH5 1076 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 FKBP15Q5T1M5 1219 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 ZFPM1Q8IX07 1006 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 PRR18Q8N4B5 295 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 CEP95Q96GE4 821 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 ZNF747Q9BV97 191 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 DEF6Q9H4E7 631 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
PCM1-219ENST00000523540 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 SCGB1D2O95969 90 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 AMY1AP04745 511 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 PDCP20941 246 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 PTPN7P35236 360 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 PER3P56645 1201 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 HHEXQ03014 270 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 DCAF17Q5H9S7 520 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 FAM47AQ5JRC9 791 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 SPTY2D1Q68D10 685 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 PDZD4Q76G19 769 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 MIGA2Q7L4E1 593 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 ZNF572Q7Z3I7 529 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 APBB1IPQ7Z5R6 666 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 TPH2Q8IWU9 490 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 CHPFQ8IZ52 775 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 CYFIP2Q96F07 1278 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 KCNH6Q9H252 994 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 HECAQ9UBI9 543 aaPredicted RBP6.06□□□□□ -1.44
PCM1-219ENST00000523540 TCEAL9Q9UHQ7 104 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 PCDHB1Q9Y5F3 818 aa6.06□□□□□ -1.44
PCM1-219ENST00000523540 TSPAN6O43657 245 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 ALOX15P16050 662 aaPredicted RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 ACRV1P26436 265 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 CYP2C19P33261 490 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 FXR1P51114 621 aaKnown RBP eCLIP6.05□□□□□ -1.44
PCM1-219ENST00000523540 ATP8B2P98198 1209 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 DSC2Q02487 901 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 SP140Q13342 867 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 CRB2Q5IJ48 1285 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 USP45Q70EL2 814 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 DOK3Q7L591 496 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 CATIPQ7Z7H3 387 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 RHOT1Q8IXI2 618 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 ZGPATQ8N5A5 531 aaKnown RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 FBXO18Q8NFZ0 1043 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 STON2Q8WXE9 905 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 MIEF2Q96C03 454 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 UHRF1Q96T88 793 aaPredicted RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 LSM14BQ9BX40 385 aaKnown RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 GTPBP4Q9BZE4 634 aaKnown RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 LDAHQ9H6V9 325 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 ZNF703Q9H7S9 590 aaPredicted RBP6.05□□□□□ -1.44
PCM1-219ENST00000523540 MANSC1Q9H8J5 431 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 LANCL2Q9NS86 450 aa6.05□□□□□ -1.44
PCM1-219ENST00000523540 PRPF3O43395 683 aaKnown RBP6.04□□□□□ -1.44
PCM1-219ENST00000523540 SGTAO43765 313 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms