RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 THP07101 528 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 PRPF4BQ13523 1007 aaKnown RBP13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 TDGQ13569 410 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 ECM1Q16610 540 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 KCTD17Q8N5Z5 321 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 STAMQ92783 540 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 KIFAP3Q92845 792 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 ZNF707Q96C28 371 aaPredicted RBP13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 APOL6Q9BWW8 343 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 NT5C3AQ9H0P0 336 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 KCNK12Q9HB15 430 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 NOL7Q9UMY1 257 aaKnown RBP13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 CACNA1HO95180 2353 aa13.96□□□□□ -0.18
TOP1MT-217ENST00000523417 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PTGESO14684 152 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 TGM5O43548 720 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 GALR2O43603 387 aaPredicted RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 N4BP1O75113 896 aaKnown RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PRKCBP05771 671 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 ASGR2P07307 311 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PRPHP41219 470 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 TOB1P50616 345 aaPredicted RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 FOSBP53539 338 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 ELAVL2Q12926 359 aaKnown RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 RTL10Q7L3V2 364 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PIK3R5Q8WYR1 880 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 ADPGKQ9BRR6 497 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 SNTG2Q9NY99 539 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 KLK14Q9P0G3 267 aa13.95□□□□□ -0.18
TOP1MT-217ENST00000523417 SF3B1O75533 1304 aaKnown RBP eCLIP13.94□□□□□ -0.188e-6■■■■■ 107
TOP1MT-217ENST00000523417 PROB1E7EW31 1015 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 TMEM189-UBE2V1I3L0A0 370 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 ZMYND10O75800 440 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 PTGDRQ13258 359 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 DCAF4L1Q3SXM0 396 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 XKR4Q5GH76 650 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 FAM184AQ8NB25 1140 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 LNX1Q8TBB1 728 aaPredicted RBP13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 CLSTN3Q9BQT9 956 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 TTPALQ9BTX7 342 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 DUSP12Q9UNI6 340 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 KIAA1024Q9UPX6 916 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
TOP1MT-217ENST00000523417 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 K7ERI5 159 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 RFPL2O75678 378 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 EDN1P05305 212 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 POU2F2P09086 479 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 HOXA9P31269 272 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 UVSSAQ2YD98 709 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 PALB2Q86YC2 1186 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 TMEM105Q8N8V8 129 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 PHOX2BQ99453 314 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 PAAF1Q9BRP4 392 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 SMOC2Q9H3U7 446 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 DNM3Q9UQ16 869 aa13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 ZFP37Q9Y6Q3 630 aaPredicted RBP13.93□□□□□ -0.18
TOP1MT-217ENST00000523417 CLUHO75153 1309 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 ARID2Q68CP9 1835 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 ANHXE9PGG2 379 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 RECQL4O94761 1208 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 HNRNPA1P09651 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 LAMP2P13473 410 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 NPR3P17342 541 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 FGFR3P22607 806 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 IL17AQ16552 155 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 RTP2Q5QGT7 225 aa13.92□□□□□ -0.18
TOP1MT-217ENST00000523417 ATF7IP2Q5U623 682 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms