RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CALUO43852 315 aaPredicted RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 DGKIO75912 1065 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 FGFR1P11362 822 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 LRRC63Q05C16 580 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 MCL1Q07820 350 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 SPOUT1Q5T280 376 aaKnown RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 NOTUMQ6P988 496 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 TSG101Q99816 390 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 C17orf80Q9BSJ5 609 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 ANP32EQ9BTT0 268 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 CDT1Q9H211 546 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 PCIF1Q9H4Z3 704 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 CGNQ9P2M7 1197 aaKnown RBP13.02□□□□□ -0.33
PVT1-215ENST00000522963 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 A0A0B4J269 797 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 CLDN3O15551 220 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 NPTXRO95502 500 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 NR3C1P04150 777 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 GARTP22102 1010 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 CTNNB1P35222 781 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■□□□□ 10.6
PVT1-215ENST00000522963 ZNF165P49910 485 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 NFIL3Q16649 462 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 SLFN12LQ6IEE8 588 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 SLC27A1Q6PCB7 646 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 FOXR2Q6PJQ5 311 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 ZC3H3Q8IXZ2 948 aaKnown RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 ABI1Q8IZP0 508 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 ENOX1Q8TC92 643 aaKnown RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 GDPD5Q8WTR4 605 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 POMGNT1Q8WZA1 660 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 LPPQ93052 612 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 CCDC51Q96ER9 411 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 TCHPQ9BT92 498 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 CBX8Q9HC52 389 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 TMEM161AQ9NX61 479 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 HSPBP1Q9NZL4 362 aa13.01□□□□□ -0.33
PVT1-215ENST00000522963 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
PVT1-215ENST00000522963 CSPG5O95196 566 aa13□□□□□ -0.33
PVT1-215ENST00000522963 MCF2P10911 925 aa13□□□□□ -0.33
PVT1-215ENST00000522963 NR2F2P24468 414 aa13□□□□□ -0.33
PVT1-215ENST00000522963 CYP2J2P51589 502 aa13□□□□□ -0.33
PVT1-215ENST00000522963 ERVK-21P61565 698 aa13□□□□□ -0.33
PVT1-215ENST00000522963 FAM189BP81408 668 aa13□□□□□ -0.33
PVT1-215ENST00000522963 ADAM9Q13443 819 aa13□□□□□ -0.33
PVT1-215ENST00000522963 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.336e-11■■■■□ 21.2
PVT1-215ENST00000522963 NCAPHQ15003 741 aa13□□□□□ -0.33
PVT1-215ENST00000522963 IQCB1Q15051 598 aa13□□□□□ -0.33
PVT1-215ENST00000522963 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
PVT1-215ENST00000522963 SPATA1Q5VX52 437 aa13□□□□□ -0.33
PVT1-215ENST00000522963 LRRC55Q6ZSA7 311 aa13□□□□□ -0.33
PVT1-215ENST00000522963 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
PVT1-215ENST00000522963 SLC9A9Q8IVB4 645 aa13□□□□□ -0.33
PVT1-215ENST00000522963 DHX40Q8IX18 779 aaKnown RBP13□□□□□ -0.33
PVT1-215ENST00000522963 TMEM192Q8IY95 271 aa13□□□□□ -0.33
PVT1-215ENST00000522963 AOPEPQ8N6M6 819 aa13□□□□□ -0.33
PVT1-215ENST00000522963 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
PVT1-215ENST00000522963 TMEM174Q8WUU8 243 aa13□□□□□ -0.33
PVT1-215ENST00000522963 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
PVT1-215ENST00000522963 SAAL1Q96ER3 474 aa13□□□□□ -0.33
PVT1-215ENST00000522963 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
PVT1-215ENST00000522963 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
PVT1-215ENST00000522963 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
PVT1-215ENST00000522963 APOL6Q9BWW8 343 aa13□□□□□ -0.33
PVT1-215ENST00000522963 FAM105AQ9NUU6 356 aa13□□□□□ -0.33
PVT1-215ENST00000522963 AGO2Q9UKV8 859 aaKnown RBP13□□□□□ -0.33
PVT1-215ENST00000522963 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
PVT1-215ENST00000522963 PRRC2BQ5JSZ5 2229 aaKnown RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 A0A0U1RQF3 1178 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 GOLGA8IPA6NC78 632 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 GOLGA8JA6NMD2 632 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CETN3O15182 167 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 OGTO15294 1046 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 FAM189A1O60320 539 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CAVIN2O95810 425 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CASP4P49662 377 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms