RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RPS6KA5O75582 802 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 ADRB2P07550 413 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CKBP12277 381 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FGFR4P22455 802 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FXR1P51114 621 aaKnown RBP eCLIP14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CCDC173Q0VFZ6 552 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 NR1I3Q14994 352 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FKBP15Q5T1M5 1219 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 SLC27A1Q6PCB7 646 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 TRAF7Q6Q0C0 670 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FAM43BQ6ZT52 329 aaPredicted RBP14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CREBRFQ8IUR6 639 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 BRSK2Q8IWQ3 736 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 DIS3LQ8TF46 1054 aaKnown RBP14.21□□□□□ -0.13
CPNE3-205ENST00000522240 SLC35C1Q96A29 364 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 CPB2Q96IY4 423 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 MFSD14AQ96MC6 490 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 FAM213AQ9BRX8 229 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 TCHPQ9BT92 498 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 VPS16Q9H269 839 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 NDST4Q9H3R1 872 aa14.21□□□□□ -0.13
CPNE3-205ENST00000522240 NOC2LQ9Y3T9 749 aaKnown RBP14.21□□□□□ -0.13
CPNE3-205ENST00000522240 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 GOLGA8IPA6NC78 632 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 GOLGA8JA6NMD2 632 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 GPR182O15218 404 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 AFPP02771 609 aaKnown RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 HOXA11P31270 313 aaPredicted RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 PBX1P40424 430 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 VAMP7P51809 220 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 PSMD6Q15008 389 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 DCAF17Q5H9S7 520 aaPredicted RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 ZNF618Q5T7W0 954 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 CRELD2Q6UXH1 353 aaPredicted RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 NECAB2Q7Z6G3 386 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 ZSWIM2Q8NEG5 633 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 ERVK-5Q9HDB9 667 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
CPNE3-205ENST00000522240 RBAKQ9NYW8 714 aaPredicted RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 CPSF3Q9UKF6 684 aaKnown RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
CPNE3-205ENST00000522240 ITIH6Q6UXX5 1313 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 STX10O60499 249 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 PQBP1O60828 265 aaKnown RBP14.19□□□□□ -0.14
CPNE3-205ENST00000522240 N4BP1O75113 896 aaKnown RBP14.19□□□□□ -0.14
CPNE3-205ENST00000522240 GHRP10912 638 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 HARSP12081 509 aaKnown RBP14.19□□□□□ -0.14
CPNE3-205ENST00000522240 SELPP16109 830 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 GRM5P41594 1212 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 LPIN1Q14693 890 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 SURF1Q15526 300 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 TRIM60Q495X7 471 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 TCERG1LQ5VWI1 586 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 LRRC8DQ7L1W4 858 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 ZBTB33Q86T24 672 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 VSTM4Q8IW00 320 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 PARD3BQ8TEW8 1205 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 ERGIC2Q96RQ1 377 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 PPP1R9BQ96SB3 815 aa14.19□□□□□ -0.14
CPNE3-205ENST00000522240 GTPBP10A4D1E9 387 aaKnown RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 PMM2O15305 246 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 P4HA2O15460 535 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 TEX33O43247 280 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 IL18RAPO95256 599 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 PARNO95453 639 aaKnown RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 CLTAP09496 248 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 GTF2H1P32780 548 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 ACOT2P49753 483 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 CLDN10P78369 228 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 UBXN1Q04323 297 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 PAK2Q13177 524 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 ZBTB41Q5SVQ8 909 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 CDR2LQ86X02 465 aaPredicted RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 PAWRQ96IZ0 340 aaKnown RBP14.18□□□□□ -0.14
CPNE3-205ENST00000522240 ST3GAL5Q9UNP4 418 aa14.18□□□□□ -0.14
CPNE3-205ENST00000522240 ANK1P16157 1881 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 NPTXRO95502 500 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 CD52P31358 61 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TNFSF9P41273 254 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 FMO5P49326 533 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TLE2Q04725 743 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TRIM14Q14142 442 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 C1orf220Q5T0J3 134 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 UBXN11Q5T124 520 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 SPECC1LQ69YQ0 1117 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 UBE2Q1Q7Z7E8 422 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms