RNA–Protein interactions for RNA: ENST00000521610.5

HDAC2-212, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-212ENST00000521610 K7ENM7 598 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 ABLIM1O14639 778 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 THP07101 528 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 GAP43P17677 238 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 OR1G1P47890 313 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 NRIP1P48552 1158 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 YARSP54577 528 aaKnown RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 KRT85P78386 507 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 GTF2BQ00403 316 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 ADAM15Q13444 863 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 E2F4Q16254 413 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 PLPP4Q5VZY2 271 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 EFHBQ8N7U6 833 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 DNAJC19Q96DA6 116 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 BICD1Q96G01 975 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 ZBTB45Q96K62 511 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 FIZ1Q96SL8 496 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-212ENST00000521610 COLEC11Q9BWP8 271 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 TLE6Q9H808 572 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 SEL1LQ9UBV2 794 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
HDAC2-212ENST00000521610 TDRD15B5MCY1 1934 aaKnown RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 PTGESO14684 152 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 CLDN3O15551 220 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 CXCL14O95715 111 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 CTSAP10619 480 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 BMP1P13497 986 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 KCNA5P22460 613 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 NMT1P30419 496 aaKnown RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 LIG4P49917 911 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 AMPD3Q01432 767 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 MCL1Q07820 350 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 TUSC3Q13454 348 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 DUSP6Q16828 381 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 SFR1Q86XK3 245 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 MRPL43Q8N983 215 aaKnown RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 DHX58Q96C10 678 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 SPATA32Q96LK8 384 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 ACAP3Q96P50 834 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 TOPORSQ9NS56 1045 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.53
HDAC2-212ENST00000521610 PRG3Q9Y2Y8 225 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-212ENST00000521610 FRMD3A2A2Y4 597 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 HIDE1A8MVS5 230 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 PER2O15055 1255 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 POLR2DO15514 142 aaKnown RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 PIGRP01833 764 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 HARSP12081 509 aaKnown RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 IDEP14735 1019 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 LTBRP36941 435 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 KCNQ1P51787 676 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 OSTNP61366 133 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 NUCB2P80303 420 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 NOLC1Q14978 699 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 NAB2Q15742 525 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 HERC4Q5GLZ8 1057 aaPredicted RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 MAP4K3Q8IVH8 894 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 CEP120Q8N960 986 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 STAMQ92783 540 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 MRPL44Q9H9J2 332 aaKnown RBP11.7□□□□□ -0.54
HDAC2-212ENST00000521610 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 PANK4Q9NVE7 773 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 MARCH5Q9NX47 278 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 ANKFY1Q9P2R3 1169 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
HDAC2-212ENST00000521610 REV3LO60673 3130 aa11.69□□□□□ -0.54
HDAC2-212ENST00000521610 SMIM28A0A1B0GU29 152 aa11.69□□□□□ -0.54
HDAC2-212ENST00000521610 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
HDAC2-212ENST00000521610 HNRNPDLO14979 420 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms