RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BROXQ5VW32 411 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 RASSF3Q86WH2 238 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 CXorf67Q86X51 503 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 ZFPM1Q8IX07 1006 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 CACTINQ8WUQ7 758 aaKnown RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 ST8SIA2Q92186 375 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 TTC1Q99614 292 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 SOX7Q9BT81 388 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 GPR87Q9BY21 358 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 PCED1AQ9H1Q7 454 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 EPC1Q9H2F5 836 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 IFT22Q9H7X7 185 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 CAMSAP1Q5T5Y3 1602 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 ZC3H13Q5T200 1668 aaKnown RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 PRSS38A1L453 326 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 PPFIA4O75335 1185 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-209ENST00000521559 LY86O95711 162 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 ADH4P08319 380 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 C1SP09871 688 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 CPEP16870 476 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 HSD3B2P26439 372 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 SOX5P35711 763 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 SESN3P58005 492 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 CD69Q07108 199 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 DCAF17Q5H9S7 520 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-209ENST00000521559 METTL24Q5JXM2 366 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 ZBTB41Q5SVQ8 909 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 AMER2Q8N7J2 671 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 MDGA1Q8NFP4 955 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 OR5M3Q8NGP4 307 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 OR14C36Q8NHC7 312 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 ZNF483Q8TF39 744 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-209ENST00000521559 ATXN2LQ8WWM7 1075 aaKnown RBP4.37□□□□□ -1.71
VPS13B-209ENST00000521559 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 CEP72Q9P209 647 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 CLCA2Q9UQC9 943 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 C3P01024 1663 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 FER1L4A9Z1Z3 1794 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 SPATA31E1Q6ZUB1 1445 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 LMTK3Q96Q04 1460 aa4.37□□□□□ -1.71
VPS13B-209ENST00000521559 TRPM2O94759 1503 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 SYNMO15061 1565 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 NARSO43776 548 aaKnown RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 GYPEP15421 78 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 BPIP17213 487 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 SCNN1GP51170 649 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 MANFP55145 182 aaKnown RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 DGCR2P98153 550 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 PURAQ00577 322 aaKnown RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 MEF2AQ02078 507 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 DUSP2Q05923 314 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 PPARAQ07869 468 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 FAPQ12884 760 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 FHL2Q14192 279 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 GJC2Q5T442 439 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 Q6ZRM9 215 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 FAM83AQ86UY5 434 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 ELOA2Q8IYF1 753 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 GLB1L3Q8NCI6 653 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 PIK3C3Q8NEB9 887 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 ACAP3Q96P50 834 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 MNTQ99583 582 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 ANO3Q9BYT9 981 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 TMX1Q9H3N1 280 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 CAAP1Q9H8G2 361 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 PRSS50Q9UI38 385 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 HDAC5Q9UQL6 1122 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 APOBEC2Q9Y235 224 aaKnown RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 REXO2Q9Y3B8 237 aaKnown RBP4.36□□□□□ -1.71
VPS13B-209ENST00000521559 PPP2R3BQ9Y5P8 575 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 XDHP47989 1333 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 ARHGAP23Q9P227 1491 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 UGGT1Q9NYU2 1555 aa4.36□□□□□ -1.71
VPS13B-209ENST00000521559 E9PCH4 1651 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 CEP152O94986 1710 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 HOXA3O43365 443 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 BRINP1O60477 761 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 RECQL4O94761 1208 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 SLPIP03973 132 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 LTA4HP09960 611 aaKnown RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 PTGS2P35354 604 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 GZMKP49863 264 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 MGAT5Q09328 741 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 CT47A1Q5JQC4 288 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 NAIF1Q69YI7 327 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 FAM180AQ6UWF9 173 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 HTR3DQ70Z44 454 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 MB21D1Q8N884 522 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 CHAC2Q8WUX2 184 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 IL17RAQ96F46 866 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 CPPED1Q9BRF8 314 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 ADGRF5Q8IZF2 1346 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 ZFYVE9O95405 1425 aa4.35□□□□□ -1.71
VPS13B-209ENST00000521559 CEP170BQ9Y4F5 1589 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-209ENST00000521559 A0A1W2PR48 441 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms