RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CCT6AP40227 531 aaKnown RBP21.69■■□□□ 1.06
PABPC1-215ENST00000520804 NUBP1P53384 320 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 TUSC3Q13454 348 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 HSP90AA2PQ14568 343 aaPredicted RBP21.69■■□□□ 1.06
PABPC1-215ENST00000520804 NBR1Q14596 966 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 PPP2R5AQ15172 486 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 TMEM132AQ24JP5 1023 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 PAAF1Q9BRP4 392 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 FNIP2Q9P278 1114 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 CACNG4Q9UBN1 327 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 PTGESO14684 152 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 RFPL2O75678 378 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 PAPLNO95428 1278 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 EDN1P05305 212 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 MYBP10242 640 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 PALB2Q86YC2 1186 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 RIN2Q8WYP3 895 aaPredicted RBP21.68■■□□□ 1.06
PABPC1-215ENST00000520804 ADPGKQ9BRR6 497 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 BHMT2Q9H2M3 363 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 PLEKHA4Q9H4M7 779 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 WDR6Q9NNW5 1121 aaKnown RBP21.68■■□□□ 1.06
PABPC1-215ENST00000520804 LRWD1Q9UFC0 647 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 USP20Q9Y2K6 914 aa21.68■■□□□ 1.06
PABPC1-215ENST00000520804 SF3B1O75533 1304 aaKnown RBP eCLIP21.68■■□□□ 1.06
PABPC1-215ENST00000520804 CASTOR2A6NHX0 329 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 TGM5O43548 720 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 RECQL4O94761 1208 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 THP07101 528 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 SPATA31D3P0C874 917 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 LIG1P18858 919 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 U2AF2P26368 475 aaKnown RBP eCLIP21.67■■□□□ 1.06
PABPC1-215ENST00000520804 CREMQ03060 361 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 TDGQ13569 410 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 PDIA5Q14554 519 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 LILRA6Q6PI73 481 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 SPATA31D4Q6ZUB0 917 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 IFT74Q96LB3 600 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 KIFC3Q9BVG8 833 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 KCNK12Q9HB15 430 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 KIAA1024Q9UPX6 916 aa21.67■■□□□ 1.06
PABPC1-215ENST00000520804 MTCL1Q9Y4B5 1905 aaKnown RBP21.67■■□□□ 1.06
PABPC1-215ENST00000520804 CLUHO75153 1309 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 RPL17P18621 184 aaKnown RBP21.66■■□□□ 1.06
PABPC1-215ENST00000520804 TOB1P50616 345 aaPredicted RBP21.66■■□□□ 1.06
PABPC1-215ENST00000520804 EFNA5P52803 228 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 NAB2Q15742 525 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 RTP2Q5QGT7 225 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 EEF1DP3Q658K8 133 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 GLYCTKQ8IVS8 523 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 IGSF22Q8N9C0 903 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 SMG7Q92540 1137 aaKnown RBP21.66■■□□□ 1.06
PABPC1-215ENST00000520804 STAMQ92783 540 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 KIFAP3Q92845 792 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 ZNF707Q96C28 371 aaPredicted RBP21.66■■□□□ 1.06
PABPC1-215ENST00000520804 IRF2BPLQ9H1B7 796 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 CXCL16Q9H2A7 254 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 POLD4Q9HCU8 107 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
PABPC1-215ENST00000520804 STK24Q9Y6E0 443 aa21.66■■□□□ 1.06
PABPC1-215ENST00000520804 N4BP1O75113 896 aaKnown RBP21.65■■□□□ 1.06
PABPC1-215ENST00000520804 KIF4AO95239 1232 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 PTGDRQ13258 359 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 DCAF4L1Q3SXM0 396 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 TMEM105Q8N8V8 129 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 SNX29Q8TEQ0 813 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 HASPINQ8TF76 798 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 NT5C3AQ9H0P0 336 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 DDX19AQ9NUU7 478 aaKnown RBP21.65■■□□□ 1.06
PABPC1-215ENST00000520804 ZDHHC7Q9NXF8 308 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 IGSF9Q9P2J2 1179 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 DUSP12Q9UNI6 340 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 PCDHB6Q9Y5E3 794 aa21.65■■□□□ 1.06
PABPC1-215ENST00000520804 GALR2O43603 387 aaPredicted RBP21.64■■□□□ 1.05
PABPC1-215ENST00000520804 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 NT5DC1Q5TFE4 455 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 FAM171A1Q5VUB5 890 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 ASTLQ6HA08 431 aaPredicted RBP21.64■■□□□ 1.05
PABPC1-215ENST00000520804 PRSS55Q6UWB4 352 aaPredicted RBP21.64■■□□□ 1.05
PABPC1-215ENST00000520804 TTPALQ9BTX7 342 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 MFSD1Q9H3U5 465 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 PIDD1Q9HB75 910 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 GDAQ9Y2T3 454 aa21.64■■□□□ 1.05
PABPC1-215ENST00000520804 GBP2P32456 591 aaPredicted RBP21.63■■□□□ 1.05
PABPC1-215ENST00000520804 ATF7IP2Q5U623 682 aa21.63■■□□□ 1.05
PABPC1-215ENST00000520804 PIK3R5Q8WYR1 880 aa21.63■■□□□ 1.05
PABPC1-215ENST00000520804 PRKD2Q9BZL6 878 aa21.63■■□□□ 1.05
PABPC1-215ENST00000520804 FAM86C1Q9NVL1 165 aa21.63■■□□□ 1.05
PABPC1-215ENST00000520804 EPS15L1Q9UBC2 864 aa21.63■■□□□ 1.05
PABPC1-215ENST00000520804 K7ERI5 159 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 LAD1O00515 517 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 CLCN5P51795 746 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 ELAVL2Q12926 359 aaKnown RBP21.62■■□□□ 1.05
PABPC1-215ENST00000520804 CEP57Q86XR8 500 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 LNX1Q8TBB1 728 aaPredicted RBP21.62■■□□□ 1.05
PABPC1-215ENST00000520804 ATOH1Q92858 354 aaPredicted RBP21.62■■□□□ 1.05
PABPC1-215ENST00000520804 MYADMQ96S97 322 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 CLSTN3Q9BQT9 956 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 DNM3Q9UQ16 869 aa21.62■■□□□ 1.05
PABPC1-215ENST00000520804 PP2D1A8MPX8 630 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms