RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 CAND2O75155 1236 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 ERLIN2O94905 339 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 CHRNA1P02708 482 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 FGFR4P22455 802 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 AXLP30530 894 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 HOXA11P31270 313 aaPredicted RBP9.27□□□□□ -0.93
VAPB-206ENST00000520497 VAMP7P51809 220 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 CYP24A1Q07973 514 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 RBL2Q08999 1139 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 PTPN21Q16825 1174 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 ZBTB41Q5SVQ8 909 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 PARD3BQ8TEW8 1205 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 CPB2Q96IY4 423 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 MSTO1Q9BUK6 570 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 NUP58Q9BVL2 599 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 AGPAT5Q9NUQ2 364 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 GINS2Q9Y248 185 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 SIK3Q9Y2K2 1263 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 FNDC1Q4ZHG4 1894 aaPredicted RBP9.27□□□□□ -0.93
VAPB-206ENST00000520497 ZNF233A6NK53 670 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 M0QZ92 97 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 PMM2O15305 246 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CD4P01730 458 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 TRIM49P0CI25 452 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TRIM49CP0CI26 452 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 MCF2P10911 925 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 COL6A1P12109 1028 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 KRT13P13646 458 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TNFSF9P41273 254 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 FMO5P49326 533 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 ACOT2P49753 483 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 WNT7BP56706 349 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 DLG4P78352 724 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CLDN10P78369 228 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 POU5F1Q01860 360 aaKnown RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 PSMD6Q15008 389 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 SYCP1Q15431 976 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 DCAF17Q5H9S7 520 aaPredicted RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 FIGNQ5HY92 759 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TCERG1LQ5VWI1 586 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 DPY19L2P1Q6NXN4 242 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CATSPER4Q7RTX7 472 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CDR2LQ86X02 465 aaPredicted RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 CNGA4Q8IV77 575 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 BRSK2Q8IWQ3 736 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 LRRC8AQ8IWT6 810 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 FAM126BQ8IXS8 530 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CCDC51Q96ER9 411 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 FAM213AQ9BRX8 229 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TTYH3Q9C0H2 523 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 TRPV6Q9H1D0 765 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 CPSF3Q9UKF6 684 aaKnown RBP9.26□□□□□ -0.93
VAPB-206ENST00000520497 PTPRSQ13332 1948 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 MYH10P35580 1976 aa9.26□□□□□ -0.93
VAPB-206ENST00000520497 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 AKR1B15C9JRZ8 316 aaPredicted RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 P4HA2O15460 535 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 TFRCP02786 760 aaKnown RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 GYPCP04921 128 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CTSHP09668 335 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CAPN2P17655 700 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 THPOP40225 353 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 MATR3P43243 847 aaKnown RBP eCLIP9.25□□□□□ -0.936e-7■■■■□ 22.1
VAPB-206ENST00000520497 KLK7P49862 253 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 PPP3CAQ08209 521 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 KCNMA1Q12791 1236 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 KYAT1Q16773 422 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 DCAF4L1Q3SXM0 396 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CBWD6Q4V339 395 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CBWD3Q5JTY5 395 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 FBXO47Q5MNV8 452 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CBWD5Q5RIA9 395 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 ZNF618Q5T7W0 954 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 C1orf53Q5VUE5 145 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 NOTUMQ6P988 496 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 SLC27A1Q6PCB7 646 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 C15orf39Q6ZRI6 1047 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 USP37Q86T82 979 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CCDC155Q8N6L0 562 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 CEP120Q8N960 986 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 ANKLE1Q8NAG6 615 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 ZNF397Q8NF99 534 aaPredicted RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 CAGE1Q8TC20 777 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 PAWRQ96IZ0 340 aaKnown RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 OSBPL7Q9BZF2 842 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 RBAKQ9NYW8 714 aaPredicted RBP9.25□□□□□ -0.93
VAPB-206ENST00000520497 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 NOC2LQ9Y3T9 749 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms