RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 RPL17P18621 184 aaKnown RBP9.07□□□□□ -0.96
LSM1-202ENST00000520286 SREBF1P36956 1147 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 ETV4P43268 484 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 LIMS1P48059 325 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 EPHB3P54753 998 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 TLE1Q04724 770 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 SNAPC2Q13487 334 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 TRIM68Q6AZZ1 485 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 CLEC14AQ86T13 490 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 IFI44Q8TCB0 444 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
LSM1-202ENST00000520286 FAM168AQ92567 244 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 LDAHQ9H6V9 325 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 TRPS1Q9UHF7 1281 aa9.07□□□□□ -0.96
LSM1-202ENST00000520286 FEZ2Q9UHY8 353 aaPredicted RBP9.07□□□□□ -0.96
LSM1-202ENST00000520286 OAS3Q9Y6K5 1087 aaKnown RBP9.07□□□□□ -0.96
LSM1-202ENST00000520286 PAPLNO95428 1278 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 AMY1AP04745 511 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 MALP21145 153 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 TNFSF4P23510 183 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 PAX3P23760 479 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 SMARCA1P28370 1054 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 IL13P35225 146 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 WNT3AP56704 352 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 ADAM15Q13444 863 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 RAPGEF1Q13905 1077 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 MYLK4Q86YV6 388 aaPredicted RBP9.06□□□□□ -0.96
LSM1-202ENST00000520286 SGPP1Q9BX95 441 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
LSM1-202ENST00000520286 USP19O94966 1318 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 ADAM23O75077 832 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 KLHL18O94889 574 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 KITP10721 976 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 DDCP20711 480 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 SLC7A1P30825 629 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 HALP42357 657 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 MEOX1P50221 254 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 PRR31Q5SQ13 230 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 PRR23BQ6ZRT6 265 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 APBB1IPQ7Z5R6 666 aaPredicted RBP9.05□□□□□ -0.96
LSM1-202ENST00000520286 ZGPATQ8N5A5 531 aaKnown RBP9.05□□□□□ -0.96
LSM1-202ENST00000520286 ANKRD42Q8N9B4 389 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 PLA2G15Q8NCC3 412 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 HERPUD2Q9BSE4 406 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 SENP6Q9GZR1 1112 aaPredicted RBP9.05□□□□□ -0.96
LSM1-202ENST00000520286 WDCPQ9H6R7 721 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 GPRC5DQ9NZD1 345 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
LSM1-202ENST00000520286 ATAD2BQ9ULI0 1458 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
LSM1-202ENST00000520286 NBNO60934 754 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 GPR32O75388 356 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 ITGA10O75578 1167 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 CRHR1P34998 444 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 NUDT10Q8NFP7 164 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 MYRIPQ8NFW9 859 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 NUDT11Q96G61 164 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 CRB3Q9BUF7 120 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 VPS11Q9H270 941 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 ZNF287Q9HBT7 754 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 SARS2Q9NP81 518 aaKnown RBP9.04□□□□□ -0.96
LSM1-202ENST00000520286 STARD7Q9NQZ5 370 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 ING3Q9NXR8 418 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 AJAP1Q9UKB5 411 aaPredicted RBP9.04□□□□□ -0.96
LSM1-202ENST00000520286 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
LSM1-202ENST00000520286 SCO2A0A1W2PP80 73 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 MYO1FO00160 1098 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 ADCY6O43306 1168 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 SEMA7AO75326 666 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 GASTP01350 101 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 BRAFP15056 766 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 ITGB5P18084 799 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 KIR2DL3P43628 341 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 ZNF543Q08ER8 600 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 PCOLCEQ15113 449 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 FLYWCH1Q4VC44 716 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 FAM209BQ5JX69 171 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 DGKKQ5KSL6 1271 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 IZUMO3Q5VZ72 239 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 LARP4Q71RC2 724 aaKnown RBP eCLIP9.03□□□□□ -0.96
LSM1-202ENST00000520286 LILRA3Q8N6C8 439 aaPredicted RBP9.03□□□□□ -0.96
LSM1-202ENST00000520286 WDR12Q9GZL7 423 aaKnown RBP9.03□□□□□ -0.96
LSM1-202ENST00000520286 L2HGDHQ9H9P8 463 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 CERS4Q9HA82 394 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 GPRC5BQ9NZH0 403 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 FAM184BQ9ULE4 1060 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 PCDHA1Q9Y5I3 950 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 PMF1-BGLAPU3KQ54 211 aa9.03□□□□□ -0.96
LSM1-202ENST00000520286 C2orf78A6NCI8 922 aa9.02□□□□□ -0.97
LSM1-202ENST00000520286 ISM1B1AKI9 464 aa9.02□□□□□ -0.97
LSM1-202ENST00000520286 NCK2O43639 380 aa9.02□□□□□ -0.97
LSM1-202ENST00000520286 PLA2G1BP04054 148 aaKnown RBP9.02□□□□□ -0.97
LSM1-202ENST00000520286 FTH1P19P0C7X4 201 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms