RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GOLGA6AQ9NYA3 693 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 OTOFQ9HC10 1997 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 EXTL3O43909 919 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 OPA1O60313 960 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 WNT7BP56706 349 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 CDR2Q01850 454 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 HLTFQ14527 1009 aaKnown RBP eCLIP27.69■■■□□ 2.02
COL13A1-213ENST00000520267 C15orf39Q6ZRI6 1047 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 PIK3R5Q8WYR1 880 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 DDX1Q92499 740 aaKnown RBP27.69■■■□□ 2.02
COL13A1-213ENST00000520267 RUFY1Q96T51 708 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 SIP14410 1827 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 GOLGA8KD6RF30 607 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 UBA1P22314 1058 aaKnown RBP27.69■■■□□ 2.02
COL13A1-213ENST00000520267 PDE6CP51160 858 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 ENPEPQ07075 957 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 RIOX2Q8IUF8 465 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 EIF1ADQ8N9N8 165 aaKnown RBP27.69■■■□□ 2.02
COL13A1-213ENST00000520267 ARL8AQ96BM9 186 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 CEP89Q96ST8 783 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 CELF4Q9BZC1 486 aaKnown RBP27.69■■■□□ 2.02
COL13A1-213ENST00000520267 HAPLN2Q9GZV7 340 aa27.69■■■□□ 2.02
COL13A1-213ENST00000520267 IGKV6D-21A0A0A0MT36 114 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 SOWAHBA6NEL2 793 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 TTI1O43156 1089 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 CALCAP01258 141 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 ACTN2P35609 894 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 POU5F1Q01860 360 aaKnown RBP27.68■■■□□ 2.02
COL13A1-213ENST00000520267 STRN3Q13033 797 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 CUL1Q13616 776 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 MESDQ14696 234 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 CFAP58Q5T655 872 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 AADACL2Q6P093 401 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 ADAT2Q7Z6V5 191 aaKnown RBP27.68■■■□□ 2.02
COL13A1-213ENST00000520267 KRT35Q92764 455 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 PCYT2Q99447 389 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 NEUROG2Q9H2A3 272 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 PAPPA2Q9BXP8 1791 aa27.68■■■□□ 2.02
COL13A1-213ENST00000520267 GSTTP1A0A1W2PQM5 241 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 DDNO94850 711 aaPredicted RBP27.67■■■□□ 2.02
COL13A1-213ENST00000520267 CLSTN1O94985 981 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 ARL2P36404 184 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 NLRP11P59045 1033 aaKnown RBP27.67■■■□□ 2.02
COL13A1-213ENST00000520267 TTMPQ5BVD1 217 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 CCDC26Q8TAB7 109 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 FAM76AQ8TAV0 307 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 PSPC1Q8WXF1 523 aaKnown RBP27.67■■■□□ 2.02
COL13A1-213ENST00000520267 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.67■■■□□ 2.02
COL13A1-213ENST00000520267 STYXL1Q9Y6J8 313 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 MTA2O94776 668 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 ABCD1P33897 745 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 MARCKSL1P49006 195 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 ACOT2P49753 483 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 GADL1Q6ZQY3 521 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 ZBTB45Q96K62 511 aaPredicted RBP27.67■■■□□ 2.02
COL13A1-213ENST00000520267 FBXO40Q9UH90 709 aa27.67■■■□□ 2.02
COL13A1-213ENST00000520267 LRRIQ4A6NIV6 560 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 ADM5C9JUS6 153 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 FARP2O94887 1054 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-213ENST00000520267 COMTP21964 271 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 NAMPTP43490 491 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 PSMD6Q15008 389 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 ZSCAN26Q16670 478 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 MAATS1Q7Z4T9 603 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 NIFKQ9BYG3 293 aaKnown RBP27.66■■■□□ 2.02
COL13A1-213ENST00000520267 KIAA1586Q9HCI6 787 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 ERVK-5Q9HDB9 667 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 KCNG1Q9UIX4 513 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 AGO2Q9UKV8 859 aaKnown RBP27.66■■■□□ 2.02
COL13A1-213ENST00000520267 SBF1O95248 1867 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 GRIN3BO60391 1043 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 CYP1A2P05177 515 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 KRT5P13647 590 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 COPB2P35606 906 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 HSPA9P38646 679 aaKnown RBP27.66■■■□□ 2.02
COL13A1-213ENST00000520267 CLDN10P78369 228 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 GCNT1Q02742 428 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 PPFIA1Q13136 1202 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 NCAPG2Q86XI2 1143 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 DEPTORQ8TB45 409 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 BTBD6Q96KE9 485 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 SPATC1LQ9H0A9 340 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 CSADQ9Y600 493 aa27.66■■■□□ 2.02
COL13A1-213ENST00000520267 MIF4GDA9UHW6 222 aaKnown RBP27.65■■■□□ 2.02
COL13A1-213ENST00000520267 DAPK3O43293 454 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 EDNRBP24530 442 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 CRELD2Q6UXH1 353 aaPredicted RBP27.65■■■□□ 2.02
COL13A1-213ENST00000520267 ZNF653Q96CK0 615 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 RPS6KC1Q96S38 1066 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 ZSWIM1Q9BR11 485 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 NUP85Q9BW27 656 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 TRPC6Q9Y210 931 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 K7ERI5 159 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 ZC3H11AO75152 810 aaKnown RBP eCLIP27.65■■■□□ 2.02
COL13A1-213ENST00000520267 KRT14P02533 472 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 CPNE8Q86YQ8 564 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 SLC7A3Q8WY07 619 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 R3HDMLQ9H3Y0 253 aa27.65■■■□□ 2.02
COL13A1-213ENST00000520267 PTPRJQ12913 1337 aa27.64■■■□□ 2.02
COL13A1-213ENST00000520267 EDN1P05305 212 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms