RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PRIM2P49643 509 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 ATP8B2P98198 1209 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 STK3Q13188 491 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 INO80DQ53TQ3 878 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 HSP90AB4PQ58FF6 505 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 IL31RAQ8NI17 732 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 SLC7A6OSQ96CW6 309 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 AJUBAQ96IF1 538 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 TMX3Q96JJ7 454 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 ARMT1Q9H993 441 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 L2HGDHQ9H9P8 463 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 TRMT13Q9NUP7 481 aaKnown RBP6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 TMEM140Q9NV12 185 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 ABCF2Q9UG63 623 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 PCDHA3Q9Y5H8 950 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 CARMIL2Q6F5E8 1435 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 MYBBP1AQ9BQG0 1328 aaKnown RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 A0A1W2PPL8 197 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 MYO1FO00160 1098 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 GPR32O75388 356 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 AMY1AP04745 511 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 SYN1P17600 705 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 SMARCA1P28370 1054 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 CAP1Q01518 475 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 PCOLCEQ15113 449 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 Q6ZUG5 572 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 LILRA3Q8N6C8 439 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 VPS37AQ8NEZ2 397 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 CCHCR1Q8TD31 782 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 GCDHQ92947 438 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 SIGLEC10Q96LC7 697 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 RIPOR3Q96MK2 946 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 YTHDC1Q96MU7 727 aaKnown RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 NT5C1BQ96P26 610 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 VRK1Q99986 396 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 UNKQ9C0B0 810 aaKnown RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 KIAA1586Q9HCI6 787 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 STARD7Q9NQZ5 370 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 CNNM1Q9NRU3 951 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 FNIP2Q9P278 1114 aa6.54□□□□□ -1.36
HMGB1P46-201ENST00000520062 C2orf78A6NCI8 922 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 NT5C1B-RDH14C9J2C7 533 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 NRP1O14786 923 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 TEX33O43247 280 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 ADCY6O43306 1168 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 ITGA10O75578 1167 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 IL2RBP14784 551 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 DDCP20711 480 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 MRE11P49959 708 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 CTXN1P60606 82 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 DLG4P78352 724 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 ADAM15Q13444 863 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SNAPC2Q13487 334 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 MTM1Q13496 603 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 GAGE13Q4V321 117 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 LARP4Q71RC2 724 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SAPCD2Q86UD0 394 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 COL23A1Q86Y22 540 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 TRMT2AQ8IZ69 625 aaKnown RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZGPATQ8N5A5 531 aaKnown RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 BRIX1Q8TDN6 353 aaKnown RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 PPM1EQ8WY54 764 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SUCLG2Q96I99 432 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SGPP1Q9BX95 441 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 OR10A2Q9H208 303 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 ARFGAP3Q9NP61 516 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SARS2Q9NP81 518 aaKnown RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 JADE2Q9NQC1 790 aa6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SPATA6Q9NWH7 488 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 SIDT1Q9NXL6 827 aaKnown RBP6.53□□□□□ -1.36
HMGB1P46-201ENST00000520062 JUNP05412 331 aaKnown RBP6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 VSIG10L2P0DP72 767 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 TRAPPC10P48553 1259 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 DUSP2Q05923 314 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 SP140Q13342 867 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 RAPGEF1Q13905 1077 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 ATP2B3Q16720 1220 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 AGBL4Q5VU57 503 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 PDZD4Q76G19 769 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 MYLK4Q86YV6 388 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 TMEFF1Q8IYR6 380 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 RAB24Q969Q5 203 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 MSLNLQ96KJ4 702 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 HERPUD2Q9BSE4 406 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 COLEC11Q9BWP8 271 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 PPCSQ9HAB8 311 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZNF287Q9HBT7 754 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 PIH1D1Q9NWS0 290 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms