RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	TATDN2	Q93075	761 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	KRT12	Q99456	494 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	MPHOSPH6	Q99547	160 aa	Known RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	HINFP	Q9BQA5	517 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	ACBD3	Q9H3P7	528 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	ACP6	Q9NPH0	428 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	ADGRA2	Q96PE1	1338 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362		A0A0B4J269	797 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	PGRMC1	O00264	195 aa	Known RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	DDX3Y	O15523	660 aa	Known RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	ADCY3	O60266	1144 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	CEP104	O60308	925 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	LGR5	O75473	907 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	C4BPA	P04003	597 aa	Known RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	EDN1	P05305	212 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	TNNT3	P45378	269 aa	Predicted RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	WNT7B	P56706	349 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	TNNC1	P63316	161 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	GPC5	P78333	572 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	CAPS	Q13938	189 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	TTLL12	Q14166	644 aa	Predicted RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZACN	Q401N2	412 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	DPY19L2	Q6NUT2	758 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	MORC4	Q8TE76	937 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	UBE2Q2	Q8WVN8	375 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	DDX1	Q92499	740 aa	Known RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM167A	Q96KS9	214 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM81B	Q96LP2	452 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	GPR20	Q99678	358 aa		13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	NOC2L	Q9Y3T9	749 aa	Known RBP	13.33	□□□□□ -0.28
SPIDR-210	ENST00000519362	MTA2	O94776	668 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	LDHA	P00338	332 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	MME	P08473	750 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	OSBP	P22059	807 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	EPHB4	P54760	987 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CDR2	Q01850	454 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	DRP2	Q13474	957 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	HSDL1	Q3SXM5	330 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CELF3	Q5SZQ8	465 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	C11orf63	Q6NUN7	778 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	EMB	Q6PCB8	327 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	IFT20	Q8IY31	132 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	BBX	Q8WY36	941 aa	Predicted RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CAVIN3	Q969G5	261 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZBTB45	Q96K62	511 aa	Predicted RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	MMP19	Q99542	508 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	TARS2	Q9BW92	718 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	MROH8	Q9H579	483 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	MED4	Q9NPJ6	270 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	DIS3	Q9Y2L1	958 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	PTPRJ	Q12913	1337 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZBTB42	B2RXF5	422 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CCDC188	H7C350	402 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	GRIN3B	O60391	1043 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	HEXIM1	O94992	359 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	ACOT2	P49753	483 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	PDE6C	P51160	858 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	KCTD2	Q14681	263 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	LDLRAD1	Q5T700	205 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	TAF3	Q5VWG9	929 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	TDRD10	Q5VZ19	366 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CCDC62	Q6P9F0	684 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	PLPPR4	Q7Z2D5	763 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM71B	Q8TC56	605 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	DHX38	Q92620	1227 aa	Known RBP	13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM84A	Q96KN4	292 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	GDAP1L1	Q96MZ0	367 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	FNBP1	Q96RU3	617 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	PI4K2A	Q9BTU6	479 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CARD9	Q9H257	536 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	AZI2	Q9H6S1	392 aa		13.32	□□□□□ -0.28
SPIDR-210	ENST00000519362	CNTNAP2	Q9UHC6	1331 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	LOC102724159	A0A0B4J2E5	919 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	IGKV6-21	A0A0C4DH24	114 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	RAD51C	O43502	376 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	SYF2	O95926	243 aa	Known RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	TNNI1	P19237	187 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	GJA5	P36382	358 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	PWP2	Q15269	919 aa	Known RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZBTB41	Q5SVQ8	909 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	DCAF12L1	Q5VU92	463 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	IER5	Q5VY09	327 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZPBP2	Q6X784	338 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	ARMC9	Q7Z3E5	817 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	PRPF31	Q8WWY3	499 aa	Known RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	ELMO3	Q96BJ8	720 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	MSTO1	Q9BUK6	570 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	CCDC113	Q9H0I3	377 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	EPB41L5	Q9HCM4	733 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	RBAK	Q9NYW8	714 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	CTTNBP2NL	Q9P2B4	639 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362	ALG6	Q9Y672	507 aa		13.31	□□□□□ -0.28
SPIDR-210	ENST00000519362		A0A0U1RQG5	324 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	TULP1	O00294	542 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	GAS2	O43903	313 aa	Known RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	MSC	O60682	206 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms