RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, human

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V1C1-204	ENST00000518959	CHST2	Q9Y4C5	530 aa		4.25	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CCNB3	Q8WWL7	1395 aa		4.25	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	NKTR	P30414	1462 aa	Known RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	NEURL4	Q96JN8	1562 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	POLR2A	P24928	1970 aa	Known RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	UBA6	A0AVT1	1052 aa	Predicted RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	RBM6	P78332	1123 aa	Known RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	NHLH2	Q02577	135 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	MAN2A1	Q16706	1144 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	TTC38	Q5R3I4	469 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ANKS3	Q6ZW76	656 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	C2orf69	Q8N8R5	385 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	TUBGCP5	Q96RT8	1024 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	TEX101	Q9BY14	249 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CELF4	Q9BZC1	486 aa	Known RBP	4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	KMT5A	Q9NQR1	393 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SEMA4G	Q9NTN9	838 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	PREX2	Q70Z35	1606 aa		4.24	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ARHGAP31	Q2M1Z3	1444 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SLIT1	O75093	1534 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	WDR91	A4D1P6	747 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	LRRC3C	A6NJW4	275 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	DIRC3	C9JPN6	131 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	MAFG	O15525	162 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	KRT37	O76014	449 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	FSBP	O95073	299 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SPDEF	O95238	335 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CFB	P00751	764 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	C6orf222	P0C671	652 aa	Predicted RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	EGR2	P11161	476 aa	Predicted RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	HSP90B1	P14625	803 aa	Known RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CASR	P41180	1078 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	BCAR1	P56945	870 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	FAM209A	Q5JX71	171 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	PIK3R6	Q5UE93	754 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	LRRC59	Q96AG4	307 aa	Known RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ZNF428	Q96B54	188 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	IL17RA	Q96F46	866 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	LSM14B	Q9BX40	385 aa	Known RBP	4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SLC52A1	Q9NWF4	448 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	DKK2	Q9UBU2	259 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CLCA2	Q9UQC9	943 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	MAP3K2	Q9Y2U5	619 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	TMEM94	Q12767	1356 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	FYCO1	Q9BQS8	1478 aa		4.23	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	KIDINS220	Q9ULH0	1771 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ALK	Q9UM73	1620 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ZSCAN20	P17040	1043 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ATF3	P18847	181 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	RANGAP1	P46060	587 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	FNTB	P49356	437 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	WNT3A	P56704	352 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SIM1	P81133	766 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	REST	Q13127	1097 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	DOK3	Q7L591	496 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	OVCH1	Q7RTY7	1134 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	XYLT1	Q86Y38	959 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ALG13	Q9NP73	1137 aa	Known RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ZNF70	Q9UC06	446 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	PIK3R4	Q99570	1358 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	TMEM2	Q9UHN6	1383 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	CAMSAP2	Q08AD1	1489 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	NCOA2	Q15596	1464 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ARHGAP23	Q9P227	1491 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	INO80	Q9ULG1	1556 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	IQGAP1	P46940	1657 aa		4.22	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	MAST3	O60307	1309 aa		4.21	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	SALL3	Q9BXA9	1300 aa		4.21	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	PRDM15	P57071	1507 aa	Predicted RBP	4.21	□□□□□ -1.73
ATP6V1C1-204	ENST00000518959	ALDH1A2	O94788	518 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	CBSL	P0DN79	551 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	CBS	P35520	551 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	MRPL49	Q13405	166 aa	Known RBP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ZNF169	Q14929	603 aa	Predicted RBP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	PDCD4	Q53EL6	469 aa	Known RBP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ZNF425	Q6IV72	752 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	SH2D3C	Q8N5H7	860 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ADAM2	Q99965	735 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	BOC	Q9BWV1	1114 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ALOXE3	Q9BYJ1	711 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ENKD1	Q9H0I2	346 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	IGSF5	Q9NSI5	407 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	NDOR1	Q9UHB4	597 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	TNPO3	Q9Y5L0	923 aa	Known RBP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	POLR1A	O95602	1720 aa	Predicted RBP	4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	SYCP2	Q9BX26	1530 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	DCC	P43146	1447 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	CNTNAP2	Q9UHC6	1331 aa		4.21	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ADGB	Q8N7X0	1667 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ITSN2	Q9NZM3	1697 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	CCDC141	Q6ZP82	1450 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	ARHGAP35	Q9NRY4	1499 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	MBD5	Q9P267	1494 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	KANK1	Q14678	1352 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	MTUS2	Q5JR59	1369 aa		4.2	□□□□□ -1.74
ATP6V1C1-204	ENST00000518959	FDXR	P22570	491 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms