RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CTNND1O60716 968 aaKnown RBP5.78□□□□□ -1.48
SQLE-202ENST00000518604 ARIH2O95376 493 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 INHBBP09529 407 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 PTPN7P35236 360 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 FLT3LGP49771 235 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 PTH1RQ03431 593 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 DUSP8Q13202 625 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 IL10RAQ13651 578 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 GRM7Q14831 915 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 GRAMD1CQ8IYS0 662 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 GIMAP8Q8ND71 665 aaPredicted RBP5.78□□□□□ -1.48
SQLE-202ENST00000518604 ARL8AQ96BM9 186 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 FAM193BQ96PV7 902 aaPredicted RBP5.78□□□□□ -1.48
SQLE-202ENST00000518604 PDCD2LQ9BRP1 358 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 PLA2G12BQ9BX93 195 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 MAN1C1Q9NR34 630 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 PCDHB1Q9Y5F3 818 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 SLC30A1Q9Y6M5 507 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 GPR32O75388 356 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 RAD17O75943 681 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 GBX1Q14549 363 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 ARHGAP29Q52LW3 1261 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 PRAMEF14Q5SWL7 426 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 GLB1LQ6UWU2 654 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 NOL8Q76FK4 1167 aaKnown RBP5.77□□□□□ -1.49
SQLE-202ENST00000518604 RSPH3Q86UC2 560 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 CIR1Q86X95 450 aaPredicted RBP5.77□□□□□ -1.49
SQLE-202ENST00000518604 C3orf20Q8ND61 904 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 CCHCR1Q8TD31 782 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 FAM167AQ96KS9 214 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 MRGPRX4Q96LA9 322 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 OBP2AQ9NY56 170 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 PLA2G3Q9NZ20 509 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 RAPGEFL1Q9UHV5 662 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 CLCA2Q9UQC9 943 aa5.77□□□□□ -1.49
SQLE-202ENST00000518604 MYBBP1AQ9BQG0 1328 aaKnown RBP5.76□□□□□ -1.49
SQLE-202ENST00000518604 VSTM5A8MXK1 200 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 B5MCH6 92 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 PJA2O43164 708 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 AMY1AP04745 511 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 ALOX15P16050 662 aaPredicted RBP5.76□□□□□ -1.49
SQLE-202ENST00000518604 DDCP20711 480 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 FXR1P51114 621 aaKnown RBP eCLIP5.76□□□□□ -1.49
SQLE-202ENST00000518604 CTXN1P60606 82 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 ATP8B2P98198 1209 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 ZNF267Q14586 743 aaPredicted RBP5.76□□□□□ -1.49
SQLE-202ENST00000518604 ATP2B3Q16720 1220 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 METTL24Q5JXM2 366 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 FKBP15Q5T1M5 1219 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 OTUD7BQ6GQQ9 843 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 DOK3Q7L591 496 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 APBB1IPQ7Z5R6 666 aaPredicted RBP5.76□□□□□ -1.49
SQLE-202ENST00000518604 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 DENND1CQ8IV53 801 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 MDM1Q8TC05 714 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 KAT5Q92993 513 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 PTPN18Q99952 460 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 ATRNL1Q5VV63 1379 aa5.76□□□□□ -1.49
SQLE-202ENST00000518604 PRC1O43663 620 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 CAND2O75155 1236 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 HK3P52790 923 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 TARDBPQ13148 414 aaKnown RBP eCLIP5.75□□□□□ -1.49
SQLE-202ENST00000518604 MTM1Q13496 603 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 TCTN3Q6NUS6 607 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 GADL1Q6ZQY3 521 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 POLNQ7Z5Q5 900 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 SRGAP1Q7Z6B7 1085 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 FAM83AQ86UY5 434 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 CAMKK1Q8N5S9 505 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 REPS2Q8NFH8 660 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 IFI44Q8TCB0 444 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 RGMAQ96B86 450 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 CDK5RAP3Q96JB5 506 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 TMX3Q96JJ7 454 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 ZNF512Q96ME7 567 aaPredicted RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 SAMD11Q96NU1 681 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 GNRHR2Q96P88 292 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 OR14A2Q96R54 314 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 DMRTA2Q96SC8 542 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 ACO2Q99798 780 aaKnown RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 EPC1Q9H2F5 836 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 FAM30AQ9NZY2 134 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 HECAQ9UBI9 543 aaPredicted RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 AJAP1Q9UKB5 411 aaPredicted RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 CNOT11Q9UKZ1 510 aaKnown RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 ZFR2Q9UPR6 939 aaKnown RBP5.75□□□□□ -1.49
SQLE-202ENST00000518604 ADAMTS20P59510 1910 aa5.75□□□□□ -1.49
SQLE-202ENST00000518604 GPR42O15529 346 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 PRICKLE3O43900 615 aaPredicted RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 MFAP3LO75121 409 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 TUSC2O75896 110 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 IPO13O94829 963 aaKnown RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 FTLP02792 175 aaPredicted RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 ITGB3P05106 788 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 SNRPA1P09661 255 aaKnown RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 FTH1P19P0C7X4 201 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 TLE1Q04724 770 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms