RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 MRPS17Q9Y2R5 130 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 MTF2Q9Y483 593 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 HES2Q9Y543 173 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 TADA2AO75478 443 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 C8AP07357 584 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 ADRB1P08588 477 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 YWHABP31946 246 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 PTENP60484 403 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 PPP2R5DQ14738 602 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 ST3GAL2Q16842 350 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 RTP2Q5QGT7 225 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 ZNF852Q6ZMS4 543 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 C4orf19Q8IY42 314 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 MTRQ99707 1265 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 TTPALQ9BTX7 342 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 MIOSQ9NXC5 875 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
TRAPPC9-203ENST00000517667 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 EML1O00423 815 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 NRLP54845 237 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 ELAVL2Q12926 359 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 PSMD5Q16401 504 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 SLC27A1Q6PCB7 646 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 RTL10Q7L3V2 364 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 BLIDQ8IZY5 108 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 GSTCDQ8NEC7 633 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 KXD1Q9BQD3 176 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 LXNQ9BS40 222 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 NFKBIZQ9BYH8 718 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 NXF3Q9H4D5 531 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 VAV3Q9UKW4 847 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
TRAPPC9-203ENST00000517667 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 M0R2N6 131 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 CCL16O15467 120 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 LRP3O75074 770 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 ECI2O75521 394 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 CD72P21854 359 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 TGM1P22735 817 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 NTHL1P78549 312 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 MBTD1Q05BQ5 628 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 ADCY1Q08828 1119 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 TUSC3Q13454 348 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 PABPC1LQ4VXU2 614 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 XKR9Q5GH70 373 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 BLOC1S2Q6QNY1 142 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 ITFG1Q8TB96 612 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 SLC7A14Q8TBB6 771 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 NETO1Q8TDF5 533 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 CLSTN3Q9BQT9 956 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 KCNMB3Q9NPA1 279 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 WRAP73Q9P2S5 460 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-203ENST00000517667 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 TBX3O15119 743 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 SLC37A4O43826 429 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 GCFC2P16383 781 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 AKAP5P24588 427 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 EPHA7Q15375 998 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 AMHR2Q16671 573 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 FAM171A1Q5VUB5 890 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 LAIR1Q6GTX8 287 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 LNX1Q8TBB1 728 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 ZSWIM4Q9H7M6 989 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 PARP2Q9UGN5 583 aa12.72□□□□□ -0.37
TRAPPC9-203ENST00000517667 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms