RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 OTUD7BQ6GQQ9 843 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 FAM111BQ6SJ93 734 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 B3GNT9Q6UX72 402 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 SPOCD1Q6ZMY3 1216 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 TAX1BP1Q86VP1 789 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 RHOT1Q8IXI2 618 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 DRC7Q8IY82 874 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 ANKRD35Q8N283 1001 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 TTC9BQ8N6N2 239 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 GIMAP8Q8ND71 665 aaPredicted RBP3.93□□□□□ -1.78
SKP1-203ENST00000517625 OR5M3Q8NGP4 307 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 OR2I1PQ8NGU4 316 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 TTC8Q8TAM2 541 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 SLC35G2Q8TBE7 412 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 RGMAQ96B86 450 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 TAAR9Q96RI9 348 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 PTPN18Q99952 460 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 FAM30AQ9NZY2 134 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 SIK3Q9Y2K2 1263 aa3.93□□□□□ -1.78
SKP1-203ENST00000517625 PATE3B3GLJ2 98 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 FAM227AF5H4B4 570 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 HOXA3O43365 443 aaPredicted RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 ITGB3P05106 788 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 GNAT2P19087 354 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 CASRP41180 1078 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 CTXN1P60606 82 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 ATP8B2P98198 1209 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 HHEXQ03014 270 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 MTM1Q13496 603 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 GRM7Q14831 915 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 NFIXQ14938 502 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 HS1BP3Q53T59 392 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 SEM1Q6ZVN7 128 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 TTLL10Q6ZVT0 673 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 SRGAP1Q7Z6B7 1085 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 CATIPQ7Z7H3 387 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 RSPH3Q86UC2 560 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 FAM83AQ86UY5 434 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 DENND1CQ8IV53 801 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 WDR75Q8IWA0 830 aaKnown RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 C3orf20Q8ND61 904 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 DNERQ8NFT8 737 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 CXorf38Q8TB03 319 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 TSR2Q969E8 191 aaKnown RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 MTFMTQ96DP5 389 aaKnown RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 FAM89AQ96GI7 184 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 MRGPRX4Q96LA9 322 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 SAMD11Q96NU1 681 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 SSBP3Q9BWW4 388 aaPredicted RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 FAM204AQ9H8W3 233 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 AGO3Q9H9G7 860 aaKnown RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 PLA2G3Q9NZ20 509 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 NCDNQ9UBB6 729 aa3.92□□□□□ -1.78
SKP1-203ENST00000517625 NOB1Q9ULX3 412 aaKnown RBP3.92□□□□□ -1.78
SKP1-203ENST00000517625 ATRNL1Q5VV63 1379 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 PRC1O43663 620 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 AP1G1O43747 822 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 MFAP3LO75121 409 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 HRGP04196 525 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 DDCP20711 480 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 MGAT1P26572 445 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 PTPN7P35236 360 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 HK3P52790 923 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 DSC2Q02487 901 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 TLE1Q04724 770 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 TARDBPQ13148 414 aaKnown RBP eCLIP3.91□□□□□ -1.78
SKP1-203ENST00000517625 DACT2Q5SW24 774 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 TCTN3Q6NUS6 607 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 DRICH1Q6PGQ1 229 aaPredicted RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 GADL1Q6ZQY3 521 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 DGKHQ86XP1 1220 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 PLXDC1Q8IUK5 500 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 MDGA1Q8NFP4 955 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 IFI44Q8TCB0 444 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 DPF2Q92785 391 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 TTC17Q96AE7 1141 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 MIEF2Q96C03 454 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 CDK5RAP3Q96JB5 506 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 ZNF512Q96ME7 567 aaPredicted RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 OR14A2Q96R54 314 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 RBM15Q96T37 977 aaKnown RBP eCLIP3.91□□□□□ -1.78
SKP1-203ENST00000517625 TMEM60Q9H2L4 133 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 WDCPQ9H6R7 721 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 ANLNQ9NQW6 1124 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 GNL3LQ9NVN8 582 aaKnown RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 SIDT1Q9NXL6 827 aaKnown RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 AJAP1Q9UKB5 411 aaPredicted RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 ZFR2Q9UPR6 939 aaKnown RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 STXBP5LQ9Y2K9 1186 aa3.91□□□□□ -1.78
SKP1-203ENST00000517625 MYBBP1AQ9BQG0 1328 aaKnown RBP3.91□□□□□ -1.78
SKP1-203ENST00000517625 BTBD11A6QL63 1104 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 VSTM5A8MXK1 200 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 PRR5-ARHGAP8B1AHC4 643 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 GPR42O15529 346 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 CTNND1O60716 968 aaKnown RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 CAND2O75155 1236 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 FTLP02792 175 aaPredicted RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 AMY1AP04745 511 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 ALAS1P13196 640 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms