RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ACAP3Q96P50 834 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 HAPLN2Q9GZV7 340 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 MRPL44Q9H9J2 332 aaKnown RBP12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 GDPD2Q9HCC8 539 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 TBC1D7Q9P0N9 293 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 SERTAD1Q9UHV2 236 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 GDAQ9Y2T3 454 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.45
SCARNA20-201ENST00000516768 PRUNE2Q8WUY3 3088 aa12.21□□□□□ -0.46
SCARNA20-201ENST00000516768 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.46
SCARNA20-201ENST00000516768 A0A0B4J269 797 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 PVALEFA0A1B0GWK0 134 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 PTGESO14684 152 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 FSCN2O14926 492 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 NCK2O43639 380 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 NR1I2O75469 434 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 LIG4P49917 911 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 OSTNP61366 133 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 GRIK3Q13003 919 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 NAB2Q15742 525 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 TIGD5Q53EQ6 642 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 TMEM173Q86WV6 379 aaPredicted RBP12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 MAP4K3Q8IVH8 894 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 CEP57L1Q8IYX8 460 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 CEP120Q8N960 986 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 HVCN1Q96D96 273 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 BICD1Q96G01 975 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 RPS6KC1Q96S38 1066 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 NGRNQ9NPE2 291 aaKnown RBP12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 PRDM6Q9NQX0 595 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 TLR9Q9NR96 1032 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 TOPORSQ9NS56 1045 aaPredicted RBP12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 COG5Q9UP83 839 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 STYXL1Q9Y6J8 313 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 NLRC5Q86WI3 1866 aa12.2□□□□□ -0.46
SCARNA20-201ENST00000516768 MYH11P35749 1972 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ANKRD63C9JTQ0 380 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 HNRNPDLO14979 420 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 EFEMP2O95967 443 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SYKP43405 635 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 AFMP43652 599 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 OR1G1P47890 313 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 NDUFA8P51970 172 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 EHHADHQ08426 723 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 KCNA1Q09470 495 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 TUSC3Q13454 348 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ALCAMQ13740 583 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 KYAT1Q16773 422 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SLC10A6Q3KNW5 377 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 TMC7Q7Z402 723 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 VPS52Q8N1B4 723 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 MRPL43Q8N983 215 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 BCL7CQ8WUZ0 217 aaPredicted RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 HLA-CQ95604 372 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ACCSQ96QU6 501 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 COLEC11Q9BWP8 271 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 PLEKHA5Q9HAU0 1116 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 ANKFY1Q9P2R3 1169 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 STK39Q9UEW8 545 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 TCHHQ07283 1943 aa12.19□□□□□ -0.46
SCARNA20-201ENST00000516768 OGTO15294 1046 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 MEFVO15553 781 aaPredicted RBP12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 FAM189A1O60320 539 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 ZNF202O95125 648 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 GCNT3O95395 438 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CXCL14O95715 111 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 ADRB2P07550 413 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CLTAP09496 248 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 MYBP10242 640 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 KCNE1P15382 129 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CASP1P29466 404 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 MATR3P43243 847 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CASP5P51878 434 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 ASIC1P78348 528 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 HYAL1Q12794 435 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 COASYQ13057 564 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 ADAM15Q13444 863 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CUL4BQ13620 913 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 BMS1Q14692 1282 aaKnown RBP12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 POSTNQ15063 836 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 CTC1Q2NKJ3 1217 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 SEZ6Q53EL9 994 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms