RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 ELF4Q99607 663 aaPredicted RBP2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 TINF2Q9BSI4 451 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 TEX101Q9BY14 249 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 RNPEPQ9H4A4 650 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 CPNE5Q9HCH3 593 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 NRIP3Q9NQ35 241 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 ASB6Q9NWX5 421 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 POLR2AP24928 1970 aaKnown RBP2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 SALL3Q9BXA9 1300 aa2.39□□□□□ -2.03
RNU6-561P-201ENST00000516222 MARCH11A6NNE9 402 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 PJA2O43164 708 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 OPA1O60313 960 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 ASLP04424 464 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 PRKCGP05129 697 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 CELA2AP08217 269 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 SNRPA1P09661 255 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 LTA4HP09960 611 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 TCF3P15923 654 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 TKTP29401 623 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 CHN2P52757 468 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 CLRN1P58418 232 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 MEF2AQ02078 507 aaPredicted RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 MGAT5Q09328 741 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 UBE3CQ15386 1083 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 KLHL22Q53GT1 634 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 C19orf54Q5BKX5 351 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 AGAP9Q5VTM2 703 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 FAM180AQ6UWF9 173 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 UNQ6494/PRO21346Q6UXR6 183 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 RNF169Q8NCN4 708 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 RTF1Q92541 710 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 TIMP4Q99727 224 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 ALG13Q9NP73 1137 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 TMEM74BQ9NUR3 256 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 FOXJ2Q9P0K8 574 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 ARPP21Q9UBL0 812 aaPredicted RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 B4GALT6Q9UBX8 382 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 MTO1Q9Y2Z2 717 aaKnown RBP2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 ZNF804BA4D1E1 1349 aa2.38□□□□□ -2.03
RNU6-561P-201ENST00000516222 ZMYM3Q14202 1370 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 A0A1B0GTW7 788 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 A0A1W2PR48 441 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 TRIM38O00635 465 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 GAS7O60861 476 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 ERN1O75460 977 aaKnown RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 ITGA10O75578 1167 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 C1QL1O75973 258 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 GLRX3O76003 335 aaKnown RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 GPANK1O95872 356 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 PLCD1P51178 756 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 KRTAP10-6P60371 365 aaPredicted RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 TUBA4AP68366 448 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 CXADRP78310 365 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 EXOSC10Q01780 885 aaKnown RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 GRM1Q13255 1194 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 LRRC32Q14392 662 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 FAM153CQ494X1 144 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 MTX3Q5HYI7 312 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 RRP12Q5JTH9 1297 aaKnown RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 KAZNQ674X7 775 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 ANKS6Q68DC2 871 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 BTNL9Q6UXG8 535 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 MED25Q71SY5 747 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 FGD2Q7Z6J4 655 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 WASF1Q92558 559 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 FUBP1Q96AE4 644 aaKnown RBP2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 ANO3Q9BYT9 981 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 WNT8AQ9H1J5 351 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 VPS33BQ9H267 617 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 WWOXQ9NZC7 414 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 TBC1D30Q9Y2I9 924 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 WNT6Q9Y6F9 365 aa2.37□□□□□ -2.03
RNU6-561P-201ENST00000516222 MANSC4A6NHS7 340 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 CGB1A6NKQ9 187 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 H3BNC9 293 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 PLD2O14939 933 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 PHF2O75151 1096 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 SEC24DO94855 1032 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 WT1P19544 449 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 CRHR1P34998 444 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 FOLR3P41439 243 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 FLT3LGP49771 235 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 POLGP54098 1239 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 SLC10A2Q12908 348 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 EIF2B5Q13144 721 aaKnown RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 FHL1Q13642 323 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 LLGL1Q15334 1064 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 CFAP100Q494V2 611 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 FAM47AQ5JRC9 791 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 GJC2Q5T442 439 aaPredicted RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 SLC9A4Q6AI14 798 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 DRC7Q8IY82 874 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 MSL3Q8N5Y2 521 aaKnown RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 MDM1Q8TC05 714 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 SNX33Q8WV41 574 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 DDB2Q92466 427 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 RPL36ALQ969Q0 106 aaKnown RBP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 SARAFQ96BY9 339 aa2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 FUBP3Q96I24 572 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU6-561P-201ENST00000516222 ADGRE3Q9BY15 652 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms