RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 XYLBO75191 536 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 KCNK5O95279 499 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 POU2F2P09086 479 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 CNR2P34972 360 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 CXCL12P48061 93 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 GAS6Q14393 721 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 ANO5Q75V66 913 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 FAM160A2Q8N612 972 aaPredicted RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 ING5Q8WYH8 240 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 DNASE1L2Q92874 299 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 RBM28Q9NW13 759 aaKnown RBP13.21□□□□□ -0.29
CSF1R-208ENST00000515239 HES2Q9Y543 173 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 GAS7O60861 476 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 SF3A2Q15428 464 aaKnown RBP13.2□□□□□ -0.3
CSF1R-208ENST00000515239 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 AASDHQ4L235 1098 aaPredicted RBP13.2□□□□□ -0.3
CSF1R-208ENST00000515239 PABPC1LQ4VXU2 614 aaKnown RBP13.2□□□□□ -0.3
CSF1R-208ENST00000515239 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 B3GNT9Q6UX72 402 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 LSM14BQ9BX40 385 aaKnown RBP13.2□□□□□ -0.3
CSF1R-208ENST00000515239 GDE1Q9NZC3 331 aa13.2□□□□□ -0.3
CSF1R-208ENST00000515239 MRPS23Q9Y3D9 190 aaKnown RBP13.2□□□□□ -0.3
CSF1R-208ENST00000515239 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 IGF2RP11717 2491 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 SOBPA7XYQ1 873 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 TADA2AO75478 443 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 PSMD10O75832 226 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 CHRNB1P11230 501 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 SLC5A9Q2M3M2 681 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 RDM1Q8NG50 284 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 SLC7A14Q8TBB6 771 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 FAM3CQ92520 227 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 JPH2Q9BR39 696 aaPredicted RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
CSF1R-208ENST00000515239 CACNG4Q9UBN1 327 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 WASF3Q9UPY6 502 aa13.19□□□□□ -0.3
CSF1R-208ENST00000515239 K7ESF4 209 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 FCARP24071 287 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 GRM2Q14416 872 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 PSMD5Q16401 504 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 RTN1Q16799 776 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 SPEM1Q8N4L4 309 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 TMEM143Q96AN5 459 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 CCDC136Q96JN2 1154 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 TRMT61BQ9BVS5 477 aaKnown RBP13.18□□□□□ -0.3
CSF1R-208ENST00000515239 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 BRD9Q9H8M2 597 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 ZNF334Q9HCZ1 680 aaPredicted RBP13.18□□□□□ -0.3
CSF1R-208ENST00000515239 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 TRPV5Q9NQA5 729 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
CSF1R-208ENST00000515239 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 AXIN1O15169 862 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 TSPAN1O60635 241 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 PAPSS2O95340 614 aaPredicted RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 RHOP08100 348 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 CDC27P30260 824 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 HOXC13P31276 330 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 USP11P51784 963 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 NPEPPSP55786 919 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 RAB33AQ14088 237 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 CCDC6Q16204 474 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms