RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 INTS8Q75QN2 995 aaKnown RBP18.29■□□□□ 0.52
AP3S1-208ENST00000515066 THNSL1Q8IYQ7 743 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 ZNF233A6NK53 670 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 NBNO60934 754 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 PAK2Q13177 524 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 DCAF4L1Q3SXM0 396 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 PARD3BQ8TEW8 1205 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 ADPGKQ9BRR6 497 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 NDST4Q9H3R1 872 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
AP3S1-208ENST00000515066 MGEA5O60502 916 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 NPTXRO95502 500 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 CLTBP09497 229 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 OSTNP61366 133 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 ENOX2Q16206 610 aaKnown RBP18.28■□□□□ 0.52
AP3S1-208ENST00000515066 VWA3BQ502W6 1294 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 DCAF17Q5H9S7 520 aaPredicted RBP18.28■□□□□ 0.52
AP3S1-208ENST00000515066 COL13A1Q5TAT6 717 aaPredicted RBP18.28■□□□□ 0.52
AP3S1-208ENST00000515066 BRSK2Q8IWQ3 736 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 MRFAP1L1Q96HT8 127 aa18.28■□□□□ 0.52
AP3S1-208ENST00000515066 RBAKQ9NYW8 714 aaPredicted RBP18.28■□□□□ 0.52
AP3S1-208ENST00000515066 TRIM49P0CI25 452 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 TRIM49CP0CI26 452 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 STAG3L1P0CL83 205 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 VAMP7P51809 220 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 KCNH2Q12809 1159 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 DSC3Q14574 896 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 PSMD6Q15008 389 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 TMC2Q8TDI7 906 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.52
AP3S1-208ENST00000515066 PPP1R12CQ9BZL4 782 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 NXF3Q9H4D5 531 aaKnown RBP18.27■□□□□ 0.52
AP3S1-208ENST00000515066 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
AP3S1-208ENST00000515066 TTC3P53804 2025 aa18.27■□□□□ 0.51
AP3S1-208ENST00000515066 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
AP3S1-208ENST00000515066 CXCL8P10145 99 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 CYP2C18P33260 490 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 PBX1P40424 430 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 GRM5P41594 1212 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 CLDN10P78369 228 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 ENPEPQ07075 957 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 TCERG1LQ5VWI1 586 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 TWF2Q6IBS0 349 aaKnown RBP18.26■□□□□ 0.51
AP3S1-208ENST00000515066 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
AP3S1-208ENST00000515066 CCDC127Q96BQ5 260 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 SCLYQ96I15 445 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 POP1Q99575 1024 aaKnown RBP18.26■□□□□ 0.51
AP3S1-208ENST00000515066 PDE11AQ9HCR9 933 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 HES2Q9Y543 173 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 PTPRJQ12913 1337 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
AP3S1-208ENST00000515066 CBFA2T2O43439 604 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 CLTAP09496 248 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 KRT13P13646 458 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 ITGB8P26012 769 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 PPP2R3AQ06190 1150 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 FILIP1LQ4L180 1135 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 SMG8Q8ND04 991 aaKnown RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 FAM84AQ96KN4 292 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 TRAIPQ9BWF2 469 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 TOPORSQ9NS56 1045 aaPredicted RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 TDRD15B5MCY1 1934 aaKnown RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 AFPP02771 609 aaKnown RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 CCL23P55773 120 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 UBXN1Q04323 297 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 HSP90AA2PQ14568 343 aaPredicted RBP18.25■□□□□ 0.51
AP3S1-208ENST00000515066 SLC10A6Q3KNW5 377 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 PLEKHG4Q58EX7 1191 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 LINC01599Q8WXQ3 324 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 VWCEQ96DN2 955 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 PDLIM2Q96JY6 352 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 IPPQ9Y573 584 aa18.25■□□□□ 0.51
AP3S1-208ENST00000515066 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 TRIM43BA6NCK2 446 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 CXCL10P02778 98 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 TPM2P07951 284 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 DLATP10515 647 aaKnown RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 FMO5P49326 533 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 POU5F1Q01860 360 aaKnown RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 KYAT1Q16773 422 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 APBB1IPQ7Z5R6 666 aaPredicted RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 RTN4RL1Q86UN2 441 aaPredicted RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 TRIM43Q96BQ3 446 aaPredicted RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 TRIM6Q9C030 488 aaPredicted RBP18.24■□□□□ 0.51
AP3S1-208ENST00000515066 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 SNTG2Q9NY99 539 aa18.24■□□□□ 0.51
AP3S1-208ENST00000515066 KIAA0355O15063 1070 aa18.23■□□□□ 0.51
AP3S1-208ENST00000515066 TPM3P06753 285 aa18.23■□□□□ 0.51
AP3S1-208ENST00000515066 CDC25BP30305 580 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms