RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TRAPPC9Q96Q05 1148 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 PSKH2Q96QS6 385 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 FERD3LQ96RJ6 166 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 CGREF1Q99674 301 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 SIK3Q9Y2K2 1263 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 USH1CQ9Y6N9 552 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 FER1L6Q2WGJ9 1857 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 TTLL13PA6NNM8 815 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 RASA4BC9J798 803 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 ZNF254O75437 659 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 SYF2O95926 243 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 HLA-DOAP06340 250 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 PCNAP12004 261 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 POLD2P49005 469 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 FKBP1AP62942 108 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 JAG1P78504 1218 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 SULT2A1Q06520 285 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 ZCWPW2Q504Y3 356 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 RNF220Q5VTB9 566 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 IRGCQ6NXR0 463 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 C1orf228Q6PIY5 440 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 UNC5DQ6UXZ4 953 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 GUF1Q8N442 669 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 HELQQ8TDG4 1101 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 DQX1Q8TE96 717 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 CCDC42Q96M95 316 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 MBOAT7Q96N66 472 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 FGFBP2Q9BYJ0 223 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 KCNMB3Q9NPA1 279 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 KCTD5Q9NXV2 234 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 MYH10P35580 1976 aa7.98□□□□□ -1.13
PDLIM5-219ENST00000514743 A0A1W2PQJ5 194 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 SPECC1L-ADORA2AF8WAN1 911 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ENC1O14682 589 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 MEIS2O14770 477 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ZNF263O14978 683 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 MAP3K7O43318 606 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 RBP3P10745 1247 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ETFBP38117 255 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 TCP10Q12799 353 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ITGB3BPQ13352 177 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 TMEM214Q6NUQ4 689 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CCDC174Q6PII3 467 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L6PQ6QN14 398 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PNKPQ96T60 521 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 TCF12Q99081 682 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 SGIP1Q9BQI5 828 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NOC4LQ9BVI4 516 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 GUCA1BQ9UMX6 200 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PCDHA2Q9Y5H9 948 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ABCB11O95342 1321 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 COL4A5P29400 1685 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 COL2A1P02458 1487 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CTAGE9A4FU28 777 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 GPR37O15354 613 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CD53P19397 219 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ETV3P41162 512 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 AARSP49588 968 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 STRIP1Q5VSL9 837 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NCAPH2Q6IBW4 605 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 DUS1LQ6P1R4 473 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NLRP9Q7RTR0 991 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 GALNT6Q8NCL4 622 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PRPF18Q99633 342 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NAPGQ99747 312 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CCSER2Q9H7U1 834 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PSTPIP2Q9H939 334 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 FAM184BQ9ULE4 1060 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CYP3A7-CYP3A51PA0A087WV96 503 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PSMD14O00487 310 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 HOXA2O43364 376 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ECE2O60344 883 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ATP2C2O75185 946 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 SEC24DO94855 1032 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PDHA1P08559 390 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 CYP3A7P24462 503 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 HNRNPH3P31942 346 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms