RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	ZC3H14	Q6PJT7	736 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	POTEG	Q6S5H5	508 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CYFIP1	Q7L576	1253 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	DYM	Q7RTS9	669 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CCDC186	Q7Z3E2	898 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ADSSL1	Q8N142	457 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	SEPT1	Q8WYJ6	367 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	GLG1	Q92896	1179 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ZNF830	Q96NB3	372 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	RTP3	Q9BQQ7	232 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	MXRA8	Q9BRK3	442 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ZNF577	Q9BSK1	485 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	GTPBP4	Q9BZE4	634 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	AZI2	Q9H6S1	392 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	MAPK8IP1	Q9UQF2	711 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	UST	Q9Y2C2	406 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ZKSCAN5	Q9Y2L8	839 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	MRPL42	Q9Y6G3	142 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	LOXHD1	Q8IVV2	1947 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	FRMPD4	Q14CM0	1322 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	PVALEF	A0A1B0GWK0	134 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	MBLAC1	A4D2B0	266 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	EML1	O00423	815 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CFH	P08603	1231 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	SPATA31C1	P0DKV0	1188 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CDK11B	P21127	795 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	MSN	P26038	577 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	RPA1	P27694	616 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.35	□□□□□ -1.23	3e-6	■■■□□ 18.1
RACK1-231	ENST00000514183	SLC26A2	P50443	739 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	VCP	P55072	806 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	UBASH3A	P57075	661 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	PLCB3	Q01970	1234 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	SP2	Q02086	613 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CYP4A11	Q02928	519 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	PPP2R5C	Q13362	524 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CAMK1	Q14012	370 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	TPD52L1	Q16890	204 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ANKRD54	Q6NXT1	300 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CNNM4	Q6P4Q7	775 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	UNC13D	Q70J99	1090 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	NIPA1	Q7RTP0	329 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	RBM23	Q86U06	439 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	GPBP1	Q86WP2	473 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CATSPER3	Q86XQ3	398 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	THNSL1	Q8IYQ7	743 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	KREMEN2	Q8NCW0	462 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	ACSF2	Q96CM8	615 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	GPRASP2	Q96D09	838 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	EIF2AK1	Q9BQI3	630 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	POLR3C	Q9BUI4	534 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	TEKT3	Q9BXF9	490 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	KCNF1	Q9H3M0	494 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	UNC45A	Q9H3U1	944 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	SAMSN1	Q9NSI8	373 aa	Known RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	FAM86C1	Q9NVL1	165 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	RABGEF1	Q9UJ41	708 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	DNM3	Q9UQ16	869 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	UBIAD1	Q9Y5Z9	338 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	CDY2A	Q9Y6F7	541 aa		7.35	□□□□□ -1.23
RACK1-231	ENST00000514183	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	PLXNA4	Q9HCM2	1894 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	NPHP3-ACAD11	A0A0J9YXS1	232 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	DENND3	A2RUS2	1198 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	CFAP99	D6REC4	459 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	IPO5	O00410	1097 aa	Known RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ARHGAP33	O14559	1287 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	PSMA7	O14818	248 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	GPR182	O15218	404 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	FGF18	O76093	207 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	IDE	P14735	1019 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	CYP11B2	P19099	503 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	RFX1	P22670	979 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	TCF7	P36402	384 aa	Predicted RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	PPP1R2	P41236	205 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	MRPS9	P82933	396 aa	Known RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	MGAT3	Q09327	533 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	STK4	Q13043	487 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	CTTN	Q14247	550 aa	Known RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.34	□□□□□ -1.23	1e-28	■□□□□ 8.2
RACK1-231	ENST00000514183	GRIK4	Q16099	956 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ATAT1	Q5SQI0	421 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	UTP14C	Q5TAP6	766 aa	Known RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	CDKAL1	Q5VV42	579 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ELMSAN1	Q6PJG2	1045 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	SLC24A5	Q71RS6	500 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ASCL5	Q7RTU5	278 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	TMC6	Q7Z403	805 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	FILIP1	Q7Z7B0	1213 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ZDHHC14	Q8IZN3	488 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	GPR161	Q8N6U8	529 aa	Known RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	EPS8L1	Q8TE68	723 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	DNAJB3	Q8WWF6	145 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	HPS3	Q969F9	1004 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	DHTKD1	Q96HY7	919 aa	Predicted RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	DYDC2	Q96IM9	177 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	RIT2	Q99578	217 aa		7.34	□□□□□ -1.23
RACK1-231	ENST00000514183	ADAM7	Q9H2U9	754 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms