RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	NPHS2	Q9NP85	383 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	HSFX1	Q9UBD0	423 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	PCDHA6	Q9UN73	950 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	PCDHB13	Q9Y5F0	798 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	PCDHA8	Q9Y5H6	950 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	ADAMTS7	Q9UKP4	1686 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	RGPD5	Q99666	1765 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDX39A	O00148	427 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDX3Y	O15523	660 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	KCNH2	Q12809	1159 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TRIM28	Q13263	835 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TTLL12	Q14166	644 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TMED2	Q15363	201 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TRIP13	Q15645	432 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SH2D4B	Q5SQS7	431 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	C10orf76	Q5T2E6	689 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARMCX6	Q7L4S7	300 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SLFN11	Q7Z7L1	901 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SATL1	Q86VE3	508 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	MAP7D3	Q8IWC1	876 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	RBM46	Q8TBY0	533 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SH3TC2	Q8TF17	1288 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	HAUS1	Q96CS2	278 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	RUNDC3B	Q96NL0	473 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TTC1	Q99614	292 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TMEM109	Q9BVC6	243 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	IQCG	Q9H095	443 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SLC4A7	Q9Y6M7	1214 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	IGSF9B	Q9UPX0	1349 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	RASA4B	C9J798	803 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	RASA4	O43374	803 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ECE2	O60344	883 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	CETP	P11597	493 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	UCHL3	P15374	230 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	CHKA	P35790	457 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PTGIR	P43119	386 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	VPS41	P49754	854 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	GALK1	P51570	392 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	WDR4	P57081	412 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	SP4	Q02446	784 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	MARK2	Q7KZI7	788 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	VPS36	Q86VN1	386 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC125	Q86Z20	511 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDX12P	Q92771	950 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	SERPINB12	Q96P63	405 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	HAPLN3	Q96S86	360 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	SMC6	Q96SB8	1091 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	UTRN	P46939	3433 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ALDH1B1	P30837	517 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	MARCKSL1	P49006	195 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	CDK7	P50613	346 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	DUS1L	Q6P1R4	473 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	GLYCTK	Q8IVS8	523 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PRELID2	Q8N945	189 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PHF12	Q96QT6	1004 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	MAGEF1	Q9HAY2	307 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARHGEF38	Q9NXL2	777 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PARP2	Q9UGN5	583 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	TDRKH	Q9Y2W6	561 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PKD1L3	Q7Z443	1732 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582		A0A0J9YVX5	310 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	TCRBV7S2A1N4T	A0A589	114 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	THAP12	O43422	761 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	TOM1	O60784	492 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PHF2	O75151	1096 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	TDP2	O95551	362 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	EYA4	O95677	639 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	TAL1	P17542	331 aa	Predicted RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	OVGP1	Q12889	678 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	NCSTN	Q92542	709 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	LARP4B	Q92615	738 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	SYNC	Q9H7C4	482 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	PAIP2B	Q9ULR5	123 aa	Known RBP	11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	NUMBL	Q9Y6R0	609 aa		11.86	□□□□□ -0.51
PDCD6-210	ENST00000513582	ABCB11	O95342	1321 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	BCL9	O00512	1426 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	WDR91	A4D1P6	747 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L5	A8MUK1	530 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	RNASEH1	O60930	286 aa	Known RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP1	O94782	785 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	AMPD1	P23109	780 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	NLRP9	Q7RTR0	991 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	CEP70	Q8NHQ1	597 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	TMEM47	Q9BQJ4	181 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	PLA2G12B	Q9BX93	195 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	RAB34	Q9BZG1	259 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	NAALADL1	Q9UQQ1	740 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	PGM3	O95394	542 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	RPL13	P26373	211 aa	Known RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	GNA11	P29992	359 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	CPA2	P48052	419 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	TRAPPC3L	Q5T215	181 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZNF34	Q8IZ26	560 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	KRT35	Q92764	455 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms