RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 PQLC1Q8N2U9 271 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 MSL3Q8N5Y2 521 aaKnown RBP4.97□□□□□ -1.61
GYPB-214ENST00000513557 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 OR7D4Q8NG98 312 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 PLBD2Q8NHP8 589 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 FNIP1Q8TF40 1166 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 GCDHQ92947 438 aaPredicted RBP4.97□□□□□ -1.61
GYPB-214ENST00000513557 KCNN1Q92952 543 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 CYFIP2Q96F07 1278 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 TMX3Q96JJ7 454 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 FAM167AQ96KS9 214 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 PTPN18Q99952 460 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 NUP62CLQ9H1M0 184 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 C14orf93Q9H972 538 aaKnown RBP4.97□□□□□ -1.61
GYPB-214ENST00000513557 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 BCO1Q9HAY6 547 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 LMBRD1Q9NUN5 540 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 FAM184BQ9ULE4 1060 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 SIK3Q9Y2K2 1263 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 IRAK3Q9Y616 596 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 BIVM-ERCC5R4GMW8 1640 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 NUP160Q12769 1436 aa4.97□□□□□ -1.61
GYPB-214ENST00000513557 H3BUI4 141 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 DDX3XO00571 662 aaKnown RBP eCLIP4.96□□□□□ -1.62
GYPB-214ENST00000513557 ARIH2O95376 493 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 SERPINB3P29508 390 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 MRE11P49959 708 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 IRAK1P51617 712 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 ALDH5A1P51649 535 aaPredicted RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 IFIT5Q13325 482 aaKnown RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 ADAM15Q13444 863 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 FGL2Q14314 439 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 POLD3Q15054 466 aaPredicted RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 KHDC1Q4VXA5 237 aaKnown RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 Q6ZUG5 572 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 LARP4Q71RC2 724 aaKnown RBP eCLIP4.96□□□□□ -1.62
GYPB-214ENST00000513557 REXO1L1PQ8IX06 675 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 PLA2G15Q8NCC3 412 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 CCHCR1Q8TD31 782 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 LPPQ93052 612 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 NT5C1BQ96P26 610 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 KATNBL1Q9H079 304 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 LANCL2Q9NS86 450 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 SPATA6Q9NWH7 488 aaPredicted RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 CALCOCO1Q9P1Z2 691 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 PCDHA3Q9Y5H8 950 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 RBM8AQ9Y5S9 174 aaKnown RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 KIF27Q86VH2 1401 aa4.96□□□□□ -1.62
GYPB-214ENST00000513557 MYBBP1AQ9BQG0 1328 aaKnown RBP4.96□□□□□ -1.62
GYPB-214ENST00000513557 C2orf78A6NCI8 922 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 GPR32O75388 356 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 GASTP01350 101 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 ZKSCAN1P17029 563 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 SMARCA1P28370 1054 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 CRHR1P34998 444 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 SREBF1P36956 1147 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 KIR2DL3P43628 341 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TM4SF4P48230 202 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 NKX6-1P78426 367 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 RALBP1Q15311 655 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 CNKSR3Q6P9H4 555 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 APOA5Q6Q788 366 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TMEFF1Q8IYR6 380 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 ENAHQ8N8S7 591 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 ACRBPQ8NEB7 543 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 IFI44Q8TCB0 444 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 PGBD4Q96DM1 585 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 SLC35A4Q96G79 324 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 CCDC138Q96M89 665 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 PWWP2AQ96N64 755 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 DMRTA2Q96SC8 542 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TBCBQ99426 244 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 CARD11Q9BXL7 1154 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 LRRC27Q9C0I9 530 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 SENP6Q9GZR1 1112 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 KIAA1683Q9H0B3 1180 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TMEM168Q9H0V1 697 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 OR10A2Q9H208 303 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 LDAHQ9H6V9 325 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 PLCB1Q9NQ66 1216 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TMEM140Q9NV12 185 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 ING3Q9NXR8 418 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 GPRC5DQ9NZD1 345 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 NTMQ9P121 344 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 ABCF2Q9UG63 623 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 STAP2Q9UGK3 403 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 TRPS1Q9UHF7 1281 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 FEZ2Q9UHY8 353 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 TPCN1Q9ULQ1 816 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 DMTF1Q9Y222 760 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 CTDP1Q9Y5B0 961 aaPredicted RBP4.95□□□□□ -1.62
GYPB-214ENST00000513557 ERICH3Q5RHP9 1530 aa4.95□□□□□ -1.62
GYPB-214ENST00000513557 CARMIL1Q5VZK9 1371 aa4.94□□□□□ -1.62
GYPB-214ENST00000513557 RHPN2P1A8MT19 583 aa4.94□□□□□ -1.62
GYPB-214ENST00000513557 PHGDHO43175 533 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms