RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 VWA8A3KMH1 1905 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 MYH15Q9Y2K3 1946 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 FAM86C2PA6NEL3 165 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 MED24O75448 989 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 OR52Z1P0C646 297 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 CTSAP10619 480 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 LIG1P18858 919 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 GLRA2P23416 452 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 U2AF2P26368 475 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCL28-203ENST00000513525 RPA1P27694 616 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 RNASELQ05823 741 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 MBTD1Q05BQ5 628 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 NCBP1Q09161 790 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 GIT2Q14161 759 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 AMHR2Q16671 573 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 RBM43Q6ZSC3 357 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 RNF135Q8IUD6 432 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 NOSTRINQ8IVI9 506 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 SMG8Q8ND04 991 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 CASP10Q92851 521 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 FUCA2Q9BTY2 467 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 PHF7Q9BWX1 381 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 CSRNP2Q9H175 543 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 S1PR5Q9H228 398 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 DNAJB4Q9UDY4 337 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 INPP5FQ9Y2H2 1132 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 IPPQ9Y573 584 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 HCFC2Q9Y5Z7 792 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 DOCK8Q8NF50 2099 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 MUC6Q6W4X9 2439 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 INO80B-WBP1J3KQ70 363 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 LCE2BO14633 110 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 B4GALT3O60512 393 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 USO1O60763 962 aaKnown RBP10.88□□□□□ -0.67
CCL28-203ENST00000513525 DDHD2O94830 711 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 ITGA4P13612 1032 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 TECP42680 631 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 SLC11A1P49279 550 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 SYCE2Q6PIF2 218 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 ZNF280BQ86YH2 543 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 MCPH1Q8NEM0 835 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 ERMNQ8TAM6 284 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 BCL7CQ8WUZ0 217 aaPredicted RBP10.88□□□□□ -0.67
CCL28-203ENST00000513525 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 POLR3FQ9H1D9 316 aaPredicted RBP10.88□□□□□ -0.67
CCL28-203ENST00000513525 HCN4Q9Y3Q4 1203 aa10.88□□□□□ -0.67
CCL28-203ENST00000513525 CLASP2O75122 1294 aaKnown RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 CXCL14O95715 111 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 CCDC192P0DO97 292 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 ARF4P18085 180 aaPredicted RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 GNL2Q13823 731 aaKnown RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 STK38Q15208 465 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 ZNF174Q15697 407 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 HAUS3Q68CZ6 603 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 CDCA2Q69YH5 1023 aaPredicted RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 LLGL2Q6P1M3 1020 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 FAM193BQ96PV7 902 aaPredicted RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 VN1R3Q9BXE9 311 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 GBP3Q9H0R5 595 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 TNMDQ9H2S6 317 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 MUTYHQ9UIF7 546 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 NOL7Q9UMY1 257 aaKnown RBP10.87□□□□□ -0.67
CCL28-203ENST00000513525 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
CCL28-203ENST00000513525 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
CCL28-203ENST00000513525 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 SPTLC2O15270 562 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 CAVIN2O95810 425 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 POMCP01189 267 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 ALDH2P05091 517 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 ME1P48163 572 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 CEBPZQ03701 1054 aaKnown RBP10.86□□□□□ -0.67
CCL28-203ENST00000513525 FAM160A1Q05DH4 1040 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 ITIH3Q06033 890 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 DSC1Q08554 894 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 SF3A1Q15459 793 aaKnown RBP10.86□□□□□ -0.67
CCL28-203ENST00000513525 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 FAM187BQ17R55 369 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 SLC27A1Q6PCB7 646 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 HACE1Q8IYU2 909 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 PDLIM2Q96JY6 352 aa10.86□□□□□ -0.67
CCL28-203ENST00000513525 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms