RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ART3Q13508 389 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 SYDE1Q6ZW31 735 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 DCAF4Q8WV16 495 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 KAT2BQ92831 832 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 FAM96AQ9H5X1 160 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 CAPN9O14815 690 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 TTC4O95801 387 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 PECAM1P16284 738 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ZCWPW2Q504Y3 356 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 KLHDC7AQ5VTJ3 777 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 SESTD1Q86VW0 696 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 FBXL16Q8N461 479 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 MAGEC3Q8TD91 643 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 CCT6BQ92526 530 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 FAM81BQ96LP2 452 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 WWP1Q9H0M0 922 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 PARVGQ9HBI0 331 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 CORO1CQ9ULV4 474 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 FAM237AA0A1B0GTK4 181 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 LRRC10BA6NIK2 292 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 UCHL3P15374 230 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 PCYT1AP49585 367 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 TTI2Q6NXR4 508 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 LRRC43Q8N309 656 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 NSL1Q96IY1 281 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 CARD9Q9H257 536 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 A0A087X0T9 212 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ZBTB5O15062 677 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 LPXNO60711 386 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 GPC4O75487 556 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 CRCPO75575 148 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 TJP3O95049 919 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 FAM228BP0C875 321 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 EEF1DP29692 281 aaKnown RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ROR2Q01974 943 aaKnown RBP11.93□□□□□ -0.5
TCOF1-211ENST00000513346 KRT81Q14533 505 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 KYNUQ16719 465 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 MEI1Q5TIA1 1274 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 OPTNQ96CV9 577 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 MTBPQ96DY7 904 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 NRBF2Q96F24 287 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 WRNIP1Q96S55 665 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ZHX2Q9Y6X8 837 aa11.93□□□□□ -0.5
TCOF1-211ENST00000513346 ERFP50548 548 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 CACNA2D1P54289 1103 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 SFR1Q86XK3 245 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 ACCSQ96QU6 501 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 MED10Q9BTT4 135 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 NUP85Q9BW27 656 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 EPB41L4AQ9HCS5 686 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 IL1RAPL1Q9NZN1 696 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 SUGT1Q9Y2Z0 365 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 PXDNQ92626 1479 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 E9PMD0 336 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 STMN1P16949 149 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 ATP4AP20648 1035 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 FSCBQ5H9T9 825 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 PCGF5Q86SE9 256 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 MREGQ8N565 214 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 TPCN2Q8NHX9 752 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 EPS8L3Q8TE67 593 aaKnown RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 ZNF512BQ96KM6 892 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 LRCH1Q9Y2L9 728 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 MCF2LO15068 1137 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 MCF2P10911 925 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 GSCP56915 257 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 DNAJC3Q13217 504 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 AP3B2Q13367 1082 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 EIF1ADQ8N9N8 165 aaKnown RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 TTC7AQ9ULT0 858 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-211ENST00000513346 TTLL3Q9Y4R7 772 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
TCOF1-211ENST00000513346 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
TCOF1-211ENST00000513346 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
TCOF1-211ENST00000513346 CDC25CP30307 473 aa11.91□□□□□ -0.5
TCOF1-211ENST00000513346 KDSRQ06136 332 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms