RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 ITGA4P13612 1032 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 OSTNP61366 133 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 GAD1Q99259 594 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 RAD9AQ99638 391 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 TRANK1O15050 2925 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 BRWD1Q9NSI6 2320 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 PDXKO00764 312 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 OGTO15294 1046 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 DDHD2O94830 711 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 CA3P07451 260 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 CXCL8P10145 99 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 GARTP22102 1010 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 ABCD1P33897 745 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 MLH1P40692 756 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 ACOT2P49753 483 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 PAN2Q504Q3 1202 aaKnown RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 SYCP3Q8IZU3 236 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 CWH43Q9H720 699 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 HSPBP1Q9NZL4 362 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 EXOC7Q9UPT5 735 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
PTPN20-227ENST00000513159 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
PTPN20-227ENST00000513159 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 LINC01553A4QN01 128 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TLL1O43897 1013 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 POMCP01189 267 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 SKIP12755 728 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CASP4P49662 377 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 SCNN1GP51170 649 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TAP1Q03518 808 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CAVIN1Q6NZI2 390 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CBWD2Q8IUF1 395 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 CCDC47Q96A33 483 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 SNX27Q96L92 541 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-227ENST00000513159 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
PTPN20-227ENST00000513159 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms