RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.85	□□□□□ -0.19
UBE2D3-231	ENST00000513098		F8W810	466 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	C2CD2L	O14523	706 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	PTGES	O14684	152 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	GLUD1	P00367	558 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	PRKCB	P05771	671 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	TH	P07101	528 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	NBR1	Q14596	966 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	IL17A	Q16552	155 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	DCAF4L1	Q3SXM0	396 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	RILPL1	Q5EBL4	403 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	NT5DC1	Q5TFE4	455 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	SUGP1	Q8IWZ8	645 aa	Known RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	TDRD5	Q8NAT2	981 aa	Known RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	ACSF2	Q96CM8	615 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	NTPCR	Q9BSD7	190 aa	Known RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	TMEM134	Q9H6X4	195 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	C17orf75	Q9HAS0	396 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	DDX19A	Q9NUU7	478 aa	Known RBP	13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	SNTG2	Q9NY99	539 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	KLK14	Q9P0G3	267 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	LIMD1	Q9UGP4	676 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	KCNG1	Q9UIX4	513 aa		13.84	□□□□□ -0.19
UBE2D3-231	ENST00000513098	DMD	P11532	3685 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DENND4A	Q7Z401	1863 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CCDC195	A0A1B0GUA6	201 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ST18	O60284	1047 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TADA2A	O75478	443 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	BRD1	O95696	1058 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	EDN1	P05305	212 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	HYI	Q5T013	277 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	IER5L	Q5T953	404 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KRT79	Q5XKE5	535 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DTHD1	Q6ZMT9	781 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CCDC149	Q6ZUS6	474 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ZBTB33	Q86T24	672 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	FEZF2	Q8TBJ5	459 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MMTAG2	Q9BU76	263 aa	Known RBP	13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TIPIN	Q9BVW5	301 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PTPRH	Q9HD43	1115 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	WDR6	Q9NNW5	1121 aa	Known RBP	13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MAN1C1	Q9NR34	630 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TNFSF13B	Q9Y275	285 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RBM19	Q9Y4C8	960 aa	Known RBP	13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	2e-6	■■■■■ 74.9
UBE2D3-231	ENST00000513098	PHLPP2	Q6ZVD8	1323 aa		13.83	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MYO15A	Q9UKN7	3530 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098		K7ERI5	159 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TGM5	O43548	720 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RECQL4	O94761	1208 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SP100	P23497	879 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	AVPR2	P30518	371 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	NPTX2	P47972	431 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MCM2	P49736	904 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ATP2C1	P98194	919 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ELAVL2	Q12926	359 aa	Known RBP	13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	XKR4	Q5GH76	650 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	EEF1DP3	Q658K8	133 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RINT1	Q6NUQ1	792 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ALKAL1	Q6UXT8	129 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	C1orf186	Q6ZWK4	172 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DAW1	Q8N136	415 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SNX29	Q8TEQ0	813 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ZNF707	Q96C28	371 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TMX3	Q96JJ7	454 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PAAF1	Q9BRP4	392 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	NT5C3A	Q9H0P0	336 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ZDHHC7	Q9NXF8	308 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ARHGAP28	Q9P2N2	729 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098	C2orf16	Q68DN1	1984 aa		13.82	□□□□□ -0.2
UBE2D3-231	ENST00000513098		E9PMD0	336 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TMEM189-UBE2V1	I3L0A0	370 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	GUCY2C	P25092	1073 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PTPN5	P54829	565 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ATF7IP2	Q5U623	682 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PDXDC1	Q6P996	788 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DCLRE1A	Q6PJP8	1040 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PRSS33	Q8NF86	280 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	LNX1	Q8TBB1	728 aa	Predicted RBP	13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RIN2	Q8WYP3	895 aa	Predicted RBP	13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PIK3R5	Q8WYR1	880 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	STAM	Q92783	540 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KCNN1	Q92952	543 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	NXPE3	Q969Y0	559 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	B3GALT6	Q96L58	329 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DRC1	Q96MC2	740 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PPP1R10	Q96QC0	940 aa	Known RBP	13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ACO2	Q99798	780 aa	Known RBP	13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TTPAL	Q9BTX7	342 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KIFC3	Q9BVG8	833 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	IRF2BPL	Q9H1B7	796 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CXCL16	Q9H2A7	254 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	POLD4	Q9HCU8	107 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	IGSF9	Q9P2J2	1179 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	EPS15L1	Q9UBC2	864 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	USP20	Q9Y2K6	914 aa		13.81	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PLXNA3	P51805	1871 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms