RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 C19orf54Q5BKX5 351 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 CATIPQ7Z7H3 387 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 LYSMD2Q8IV50 215 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 CCHCR1Q8TD31 782 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 NKD2Q969F2 451 aaPredicted RBP5.31□□□□□ -1.56
HTT-210ENST00000512909 CYFIP2Q96F07 1278 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 FMNL2Q96PY5 1086 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 FDXACB1Q9BRP7 624 aaPredicted RBP5.31□□□□□ -1.56
HTT-210ENST00000512909 HAPLN2Q9GZV7 340 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 ZCCHC4Q9H5U6 513 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 DMRT3Q9NQL9 472 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 CNNM1Q9NRU3 951 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 LANCL2Q9NS86 450 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 C1orf112Q9NSG2 853 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 MOCS1Q9NZB8 636 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 CFAP20Q9Y6A4 193 aaKnown RBP5.31□□□□□ -1.56
HTT-210ENST00000512909 YEATS2Q9ULM3 1422 aa5.31□□□□□ -1.56
HTT-210ENST00000512909 A0A0A6YYK5 440 aaPredicted RBP5.3□□□□□ -1.56
HTT-210ENST00000512909 TEX33O43247 280 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 CDC14BO60729 498 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 ARIH2O95376 493 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 KRT1P04264 644 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 POU2F2P09086 479 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 PTH1RQ03431 593 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 DLX2Q07687 328 aaPredicted RBP5.3□□□□□ -1.56
HTT-210ENST00000512909 MGAT2Q10469 447 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 ERICH6BQ5W0A0 696 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 USP45Q70EL2 814 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 SLC41A1Q8IVJ1 513 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 PIK3C3Q8NEB9 887 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 SHCBP1Q8NEM2 672 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 TTC8Q8TAM2 541 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 MTFMTQ96DP5 389 aaKnown RBP5.3□□□□□ -1.56
HTT-210ENST00000512909 C1GALT1C1Q96EU7 318 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 MVB12AQ96EY5 273 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 LRRC37BQ96QE4 947 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 LMF1Q96S06 567 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 TCF25Q9BQ70 676 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 SOX7Q9BT81 388 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 ING3Q9NXR8 418 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 POLHQ9Y253 713 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 PTPN22Q9Y2R2 807 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 CTDP1Q9Y5B0 961 aaPredicted RBP5.3□□□□□ -1.56
HTT-210ENST00000512909 PCDHA13Q9Y5I0 950 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 ATP10AO60312 1499 aa5.3□□□□□ -1.56
HTT-210ENST00000512909 FRMPD2Q68DX3 1309 aaPredicted RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 FYCO1Q9BQS8 1478 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 MTSS1O43312 755 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 NBPF7P0C2Y1 421 aaPredicted RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 IL2RBP14784 551 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 CRHR1P34998 444 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 PPP2CBP62714 309 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 PPP2CAP67775 309 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 APBA1Q02410 837 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 HHEXQ03014 270 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 UBXN11Q5T124 520 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 ABHD15Q6UXT9 468 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 KSR2Q6VAB6 950 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 CCDC146Q8IYE0 955 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 MARCH10Q8NA82 808 aaPredicted RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 OR7D4Q8NG98 312 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 PPP1R14CQ8TAE6 165 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 RABGGTAQ92696 567 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 TTC17Q96AE7 1141 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 RGMAQ96B86 450 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 TMX3Q96JJ7 454 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 BCO1Q9HAY6 547 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 RRP7BPQ9NSQ0 103 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 SLC4A7Q9Y6M7 1214 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 KIF14Q15058 1648 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 TRAPPC8Q9Y2L5 1435 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 PCF11O94913 1555 aaKnown RBP5.29□□□□□ -1.56
HTT-210ENST00000512909 TTC37Q6PGP7 1564 aa5.29□□□□□ -1.56
HTT-210ENST00000512909 NPEPPSL1A6NEC2 478 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 SLC16A6O15403 523 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 LAMTOR5O43504 91 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 SLC26A4O43511 780 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 ITGA10O75578 1167 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 ZRANB2O95218 330 aaKnown RBP eCLIP5.28□□□□□ -1.56
HTT-210ENST00000512909 MYL1P05976 194 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 ZSCAN22P10073 491 aaPredicted RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 RAP2AP10114 183 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 ZNF827Q17R98 1081 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 LILRA6Q6PI73 481 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 DAAM2Q86T65 1068 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 ZDHHC14Q8IZN3 488 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 AOPEPQ8N6M6 819 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 C3orf20Q8ND61 904 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 HPS3Q969F9 1004 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 IL17RAQ96F46 866 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms