RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 EFHBQ8N7U6 833 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 RNF169Q8NCN4 708 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 RSAD2Q8WXG1 361 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 SLC29A3Q9BZD2 475 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 H2AFY2Q9P0M6 372 aaPredicted RBP4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 TMPRSS11EQ9UL52 423 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 ATP11BQ9Y2G3 1177 aa4.33□□□□□ -1.72
SCAMP1-204ENST00000511551 PRSS38A1L453 326 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 ITGA10O75578 1167 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF81P51508 661 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 CFAP100Q494V2 611 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 SPDYE7PQ495Y7 208 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 SLC41A1Q8IVJ1 513 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 MAPKAPK5Q8IW41 473 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 GLB1L2Q8IW92 636 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 SNX33Q8WV41 574 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 FERMT2Q96AC1 680 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 CEP95Q96GE4 821 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 BOD1Q96IK1 185 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF778Q96MU6 729 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 SRPK1Q96SB4 655 aaKnown RBP4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 MTFR1LQ9H019 292 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 KLHL11Q9NVR0 708 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 SLC17A6Q9P2U8 582 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 MSRAQ9UJ68 235 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
SCAMP1-204ENST00000511551 PJA2O43164 708 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 TGM5O43548 720 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 F2P00734 622 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 SDSP20132 328 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 CHN2P52757 468 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 ABHD15Q6UXT9 468 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 PDZD4Q76G19 769 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 PASD1Q8IV76 773 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF366Q8N895 744 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 OR56A1Q8NGH5 318 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 MDM1Q8TC05 714 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 ALOXE3Q9BYJ1 711 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 WNT8AQ9H1J5 351 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 IFT57Q9NWB7 429 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 EVLQ9UI08 416 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 PRSS50Q9UI38 385 aa4.31□□□□□ -1.72
SCAMP1-204ENST00000511551 ZFPL1O95159 310 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 GTF2F1P35269 517 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 PHC1P78364 1004 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 DSG1Q02413 1049 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 OCA2Q04671 838 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 MFSD14BQ5SR56 506 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF425Q6IV72 752 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 FAM43AQ8N2R8 423 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 SLC35B2Q8TB61 432 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 GPRC5DQ9NZD1 345 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 ARPP21Q9UBL0 812 aaPredicted RBP4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 NOX1Q9Y5S8 564 aa4.3□□□□□ -1.72
SCAMP1-204ENST00000511551 TMEM127O75204 238 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 RFPL3O75679 317 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 CRHR1P34998 444 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 RBM25P49756 843 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 FLT3LGP49771 235 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 CLRN1P58418 232 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 MRPS35P82673 323 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 FAM47AQ5JRC9 791 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 ATXN7L2Q5T6C5 722 aaPredicted RBP4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF788Q6ZQV5 615 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF610Q8N9Z0 462 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 GALNT9Q9HCQ5 603 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 TBCCD1Q9NVR7 557 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 LRIT1Q9P2V4 623 aa4.29□□□□□ -1.72
SCAMP1-204ENST00000511551 PNPLA7Q6ZV29 1317 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 A0A1B0GTW7 788 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 WIPF3A6NGB9 483 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 IKBKBO14920 756 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 PRAMEF4O60810 478 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 GAS7O60861 476 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 CTSSP25774 331 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 PROK1P58294 105 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 PPARAQ07869 468 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 PRAMEF14Q5SWL7 426 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 TSHZ3Q63HK5 1081 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 OR14C36Q8NHC7 312 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 CHTF18Q8WVB6 975 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 TIMP4Q99727 224 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 CASS4Q9NQ75 786 aa4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 ZNF70Q9UC06 446 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-204ENST00000511551 KCNAB3O43448 404 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 POU3F2P20265 443 aaPredicted RBP4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 CXADRP78310 365 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 TRIM25Q14258 630 aaKnown RBP4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 SOGA3Q5TF21 947 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 ACTRT2Q8TDY3 377 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 ZNF428Q96B54 188 aa4.27□□□□□ -1.73
SCAMP1-204ENST00000511551 NACC2Q96BF6 587 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms