RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 KCNA5P22460 613 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 PROZP22891 400 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 GRM5P41594 1212 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 NRIP1P48552 1158 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 LIG4P49917 911 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 MRPS5P82675 430 aaKnown RBP15.31■□□□□ 0.04
DDX41-212ENST00000511040 DSC1Q08554 894 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 GRIK3Q13003 919 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 GLRA4Q5JXX5 417 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 TMC7Q7Z402 723 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 IQUBQ8NA54 791 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 AUTS2Q8WXX7 1259 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
DDX41-212ENST00000511040 VN1R3Q9BXE9 311 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 HAPLN2Q9GZV7 340 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 TLE6Q9H808 572 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 UBE2ZQ9H832 354 aaPredicted RBP15.31■□□□□ 0.04
DDX41-212ENST00000511040 GDPD2Q9HCC8 539 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 MARCH5Q9NX47 278 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 CLDND1Q9NY35 253 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 COG5Q9UP83 839 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
DDX41-212ENST00000511040 CASTOR2A6NHX0 329 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 HIDE1A8MVS5 230 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 H3BQ06 376 aaPredicted RBP15.3■□□□□ 0.04
DDX41-212ENST00000511040 TOM1L1O75674 476 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 KCNQ1P51787 676 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 TCHHQ07283 1943 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 NOLC1Q14978 699 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX41-212ENST00000511040 HERC4Q5GLZ8 1057 aaPredicted RBP15.3■□□□□ 0.04
DDX41-212ENST00000511040 ZPBP2Q6X784 338 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
DDX41-212ENST00000511040 ATXN2LQ8WWM7 1075 aaKnown RBP15.3■□□□□ 0.04
DDX41-212ENST00000511040 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 FGFBP2Q9BYJ0 223 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
DDX41-212ENST00000511040 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 KBTBD4Q9NVX7 518 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 KCNH3Q9ULD8 1083 aa15.3■□□□□ 0.04
DDX41-212ENST00000511040 ZMYM2Q9UBW7 1377 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 A0A1B0GVL5 298 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 TISP43B9A030 160 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
DDX41-212ENST00000511040 CLDN3O15551 220 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 CXCL14O95715 111 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 GAP43P17677 238 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 CASP1P29466 404 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
DDX41-212ENST00000511040 ASIC1P78348 528 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 RBM10P98175 930 aaKnown RBP15.29■□□□□ 0.04
DDX41-212ENST00000511040 GTF2BQ00403 316 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 PDE12Q6L8Q7 609 aaKnown RBP15.29■□□□□ 0.04
DDX41-212ENST00000511040 ZNF720Q7Z2F6 126 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 HPS3Q969F9 1004 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 PABPC5Q96DU9 382 aaKnown RBP15.29■□□□□ 0.04
DDX41-212ENST00000511040 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 PAAF1Q9BRP4 392 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 TNMDQ9H2S6 317 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 CUEDC2Q9H467 287 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 A0A0C4DFX4 3053 aa15.29■□□□□ 0.04
DDX41-212ENST00000511040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.28■□□□□ 0.04
DDX41-212ENST00000511040 C2orf71A6NGG8 1288 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 ANKRD63C9JTQ0 380 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
DDX41-212ENST00000511040 NR1I2O75469 434 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 GCNT3O95395 438 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 THP07101 528 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 MYBP10242 640 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 PFKFB1P16118 471 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 AFMP43652 599 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 CASP5P51878 434 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 NUCB2P80303 420 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 DLX2Q07687 328 aaPredicted RBP15.28■□□□□ 0.04
DDX41-212ENST00000511040 MCL1Q07820 350 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 KCNA1Q09470 495 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 COASYQ13057 564 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 TUSC3Q13454 348 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 SMC1AQ14683 1233 aaKnown RBP15.28■□□□□ 0.04
DDX41-212ENST00000511040 CLUL1Q15846 466 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 SLC39A4Q6P5W5 647 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 TAS1R1Q7RTX1 841 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 HASPINQ8TF76 798 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 TRIM9Q9C026 710 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 ZBP1Q9H171 429 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 BLZF1Q9H2G9 400 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
DDX41-212ENST00000511040 SEL1LQ9UBV2 794 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 UNC80Q8N2C7 3258 aa15.28■□□□□ 0.04
DDX41-212ENST00000511040 TRIP11Q15643 1979 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 SMIM28A0A1B0GU29 152 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms