RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 KIAA1683Q9H0B3 1180 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 TAF1DQ9H5J8 278 aaPredicted RBP3.79□□□□□ -1.8
GYPB-211ENST00000510196 CHPF2Q9P2E5 772 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 ARHGAP28Q9P2N2 729 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 SH3BP1Q9Y3L3 701 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 CCDC88AQ3V6T2 1871 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 VIRMAQ69YN4 1812 aaKnown RBP3.79□□□□□ -1.8
GYPB-211ENST00000510196 KIF13BQ9NQT8 1826 aa3.79□□□□□ -1.8
GYPB-211ENST00000510196 WDR90Q96KV7 1748 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 CEMIPQ8WUJ3 1361 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 COL4A3Q01955 1670 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 UBN2Q6ZU65 1347 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 CCDC85CA6NKD9 419 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 ACOT7O00154 380 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 IKBKBO14920 756 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 KIAA0355O15063 1070 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 HTATSF1O43719 755 aaKnown RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 GNAT1P11488 350 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 COL6A2P12110 1019 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 TMPOP42166 694 aaKnown RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 GMPSP49915 693 aaPredicted RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 GFRA1P56159 465 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 HGFACQ04756 655 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 DEFB115Q30KQ5 88 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 SV2CQ496J9 727 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 DENND5AQ6IQ26 1287 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 RSPO2Q6UXX9 243 aaPredicted RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 DLK2Q6UY11 383 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 KCTD1Q719H9 257 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 RHOUQ7L0Q8 258 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 FILIP1Q7Z7B0 1213 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 ZNF276Q8N554 614 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 TMEM145Q8NBT3 493 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 WDR48Q8TAF3 677 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 PROKR1Q8TCW9 393 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 RABGGTAQ92696 567 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 LGR4Q9BXB1 951 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 SYNPO2LQ9H987 977 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 AGO3Q9H9G7 860 aaKnown RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 DBNDD1Q9H9R9 158 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 SCAF8Q9UPN6 1271 aaKnown RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 EFR3BQ9Y2G0 817 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 SLX4Q8IY92 1834 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 ARFGEF1Q9Y6D6 1849 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
GYPB-211ENST00000510196 TIAM2Q8IVF5 1701 aa3.78□□□□□ -1.8
GYPB-211ENST00000510196 SHTN1A0MZ66 631 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 UNCXA6NJT0 531 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 ERVV-1B6SEH8 477 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 APAF1O14727 1248 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 CELF2O95319 508 aaKnown RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 NTSR2O95665 410 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 ABHD16AO95870 558 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 ITGB1P05556 798 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 SMAD3P84022 425 aaKnown RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 RIN1Q13671 783 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 SF1Q15637 639 aaKnown RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 RABL3Q5HYI8 236 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 SLC35F1Q5T1Q4 408 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 HECTD2Q5U5R9 776 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 Q6ZRM9 215 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 OTOP2Q7RTS6 562 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 RD3Q7Z3Z2 195 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 PNMA8AQ86V59 439 aaPredicted RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 ZNF227Q86WZ6 799 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 GPC2Q8N158 579 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 OR14K1Q8NGZ2 314 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 WNK4Q96J92 1243 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 PLEKHF1Q96S99 279 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 MYD88Q99836 296 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 GLIS2Q9BZE0 524 aaPredicted RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 CYP4F11Q9HBI6 524 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 GALNT8Q9NY28 637 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 TELO2Q9Y4R8 837 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 ZNF831Q5JPB2 1677 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 TNRC6CQ9HCJ0 1690 aaKnown RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 ADAMTS7Q9UKP4 1686 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 SBF1O95248 1867 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 BRCA1P38398 1863 aaKnown RBP3.77□□□□□ -1.81
GYPB-211ENST00000510196 ANKRD31Q8N7Z5 1873 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 PCNTO95613 3336 aa3.77□□□□□ -1.81
GYPB-211ENST00000510196 NPC1L1Q9UHC9 1359 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 UBR2Q8IWV8 1755 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 ABCC4O15439 1325 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 SCN7AQ01118 1682 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 A0A0G2JNJ9 132 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 A0A1W2PRX2 142 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 GOLGA6L6A8MZA4 724 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 H7C1D1 291 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 CTCFP49711 727 aaPredicted RBP3.76□□□□□ -1.81
GYPB-211ENST00000510196 CXCL9Q07325 125 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 PRKG1Q13976 671 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 RALBP1Q15311 655 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 PARP10Q53GL7 1025 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 HSP90AB3PQ58FF7 597 aa3.76□□□□□ -1.81
GYPB-211ENST00000510196 HABP4Q5JVS0 413 aaKnown RBP3.76□□□□□ -1.81
GYPB-211ENST00000510196 BTBD8Q5XKL5 378 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms