RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 PDZD7Q9H5P4 517 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 POLD4Q9HCU8 107 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 DDX19AQ9NUU7 478 aaKnown RBP11.19□□□□□ -0.62
SCARB2-204ENST00000509994 MIOSQ9NXC5 875 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 SNTG2Q9NY99 539 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 CACNG4Q9UBN1 327 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 FBXL21Q9UKT6 434 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 KIAA1024Q9UPX6 916 aa11.19□□□□□ -0.62
SCARB2-204ENST00000509994 A0A1B0GUA9 196 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 STK25O00506 426 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 ST18O60284 1047 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 RECQL4O94761 1208 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 PDGFBP01127 241 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 THP07101 528 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 CYP11B2P19099 503 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 TUSC3Q13454 348 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 CDCA2Q69YH5 1023 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 ZDHHC14Q8IZN3 488 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 PRSS33Q8NF86 280 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 STAMQ92783 540 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 KIFAP3Q92845 792 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 ASIC4Q96FT7 647 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCARB2-204ENST00000509994 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 CITO14578 2027 aa11.18□□□□□ -0.62
SCARB2-204ENST00000509994 H3BQV1 296 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 RFPL2O75678 378 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
SCARB2-204ENST00000509994 AVPR2P30518 371 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCARB2-204ENST00000509994 EFNA5P52803 228 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 DSG1Q02413 1049 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 PTGDRQ13258 359 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 DMP1Q13316 513 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-204ENST00000509994 DCAF4L1Q3SXM0 396 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 PRSS55Q6UWB4 352 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-204ENST00000509994 C15orf39Q6ZRI6 1047 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 FLCNQ8NFG4 579 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 FEZF2Q8TBJ5 459 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 ATOH1Q92858 354 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-204ENST00000509994 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 GPR62Q9BZJ7 368 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 FAM86C1Q9NVL1 165 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 POLIQ9UNA4 740 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 PCDHB6Q9Y5E3 794 aa11.17□□□□□ -0.62
SCARB2-204ENST00000509994 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 CLUHO75153 1309 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 K7ERI5 159 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 ACKR2O00590 384 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 LILRB3O75022 631 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 KIF4AO95239 1232 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 MUTP22033 750 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 MATR3P43243 847 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCARB2-204ENST00000509994 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
SCARB2-204ENST00000509994 PEX3P56589 373 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 OSTNP61366 133 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 RABEP1Q15276 862 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 PSMD5Q16401 504 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 FAM187BQ17R55 369 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 GLRA4Q5JXX5 417 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 ATF7IP2Q5U623 682 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 EEF1DP3Q658K8 133 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 GET4Q7L5D6 327 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-204ENST00000509994 PAAF1Q9BRP4 392 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 TCHPQ9BT92 498 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 TTPALQ9BTX7 342 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 FZD8Q9H461 694 aa11.16□□□□□ -0.62
SCARB2-204ENST00000509994 PIEZO1Q92508 2521 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 E9PMD0 336 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 TGM5O43548 720 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 HIP1RO75146 1068 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 RAD51AP2Q09MP3 1159 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 ELAVL2Q12926 359 aaKnown RBP11.15□□□□□ -0.62
SCARB2-204ENST00000509994 TDGQ13569 410 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 ECM1Q16610 540 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 GSTCDQ8NEC7 633 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 CMASQ8NFW8 434 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-204ENST00000509994 DRC1Q96MC2 740 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 CCDC94Q9BW85 323 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-204ENST00000509994 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
SCARB2-204ENST00000509994 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms