RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LRRN2O75325 713 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
RAB40C-202ENST00000509637 LAMP2P13473 410 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 GLULP15104 373 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 HTR4Q13639 388 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 ECM1Q16610 540 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 CATSPER3Q86XQ3 398 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 LNX1Q8TBB1 728 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-202ENST00000509637 GPR152Q8TDT2 470 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 PRKD2Q9BZL6 878 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 FNIP2Q9P278 1114 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 PARP2Q9UGN5 583 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 DCHS1Q96JQ0 3298 aa17.66■□□□□ 0.42
RAB40C-202ENST00000509637 GVINP1Q7Z2Y8 2422 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 CASTOR2A6NHX0 329 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 ZMYND10O75800 440 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 KIF4AO95239 1232 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 TFDP1Q14186 410 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAB40C-202ENST00000509637 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 SLC27A1Q6PCB7 646 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 RSPO2Q6UXX9 243 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-202ENST00000509637 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
RAB40C-202ENST00000509637 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 NAP1L4Q99733 375 aaKnown RBP17.65■□□□□ 0.42
RAB40C-202ENST00000509637 PDZD7Q9H5P4 517 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 SNTG2Q9NY99 539 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 STK39Q9UEW8 545 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 FBXL21Q9UKT6 434 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 TRIP11Q15643 1979 aa17.65■□□□□ 0.42
RAB40C-202ENST00000509637 GRIK3Q13003 919 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 CDCA2Q69YH5 1023 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-202ENST00000509637 CYP26C1Q6V0L0 522 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 NOSTRINQ8IVI9 506 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 GPR65Q8IYL9 337 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 ADSSL1Q8N142 457 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 HDAC7Q8WUI4 952 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 FGF14Q92915 247 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 PLEKHA4Q9H4M7 779 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 TBC1D17Q9HA65 648 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
RAB40C-202ENST00000509637 LRRIQ4A6NIV6 560 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 NEMFO60524 1076 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 SRFP11831 508 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 XBP1P17861 261 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 HSP90AA2PQ14568 343 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 FAM187BQ17R55 369 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 PARM1Q6UWI2 310 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 GET4Q7L5D6 327 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 GRASPQ7Z6J2 395 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 NKD2Q969F2 451 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 RTP3Q9BQQ7 232 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 ZDHHC7Q9NXF8 308 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 FBXW11Q9UKB1 542 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 NUMBLQ9Y6R0 609 aa17.63■□□□□ 0.41
RAB40C-202ENST00000509637 EP300Q09472 2414 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-202ENST00000509637 NRG2O14511 850 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-202ENST00000509637 TADA2AO75478 443 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 RECQL4O94761 1208 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 SEC24BO95487 1268 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 C1RP00736 705 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 TUSC3Q13454 348 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 NT5DC1Q5TFE4 455 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 MAML2Q8IZL2 1156 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-202ENST00000509637 ITFG1Q8TB96 612 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 KIFC3Q9BVG8 833 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 FOXQ1Q9C009 403 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 TRIM6Q9C030 488 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-202ENST00000509637 R4GN57 208 aa17.62■□□□□ 0.41
RAB40C-202ENST00000509637 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 MCM7P33993 719 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 GPC5P78333 572 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 C4orf32Q8N8J7 132 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 PIK3R5Q8WYR1 880 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 PIDD1Q9HB75 910 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.61■□□□□ 0.41
RAB40C-202ENST00000509637 HCFC1R1Q9NWW0 138 aa17.61■□□□□ 0.41
RAB40C-202ENST00000509637 MTF2Q9Y483 593 aaPredicted RBP17.61■□□□□ 0.41
RAB40C-202ENST00000509637 FANCMQ8IYD8 2048 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 SHISA7A6NL88 538 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 CCL16O15467 120 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 MEFVO15553 781 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-202ENST00000509637 ANAPC15P60006 121 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
RAB40C-202ENST00000509637 ZNF174Q15697 407 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 CEP57Q86XR8 500 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 C3orf58Q8NDZ4 430 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 WASF1Q92558 559 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 STAMQ92783 540 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 TTPALQ9BTX7 342 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms