RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LIG3P49916 1009 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 DENND2CQ68D51 928 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 OTUD6BQ8N6M0 293 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 C3orf20Q8ND61 904 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CEP170P1Q96L14 293 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 POP1Q99575 1024 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 RPAP3Q9H6T3 665 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 PCDHA3Q9Y5H8 950 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 MEFVO15553 781 aaPredicted RBP19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 NUDT17P0C025 328 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 PYGMP11217 842 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 MTMR2Q13614 643 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 FBXO25Q8TCJ0 367 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 NTPCRQ9BSD7 190 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 CNOT10Q9H9A5 744 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 RWDD2BP57060 319 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 CIAPIN1Q6FI81 312 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 PACS2Q86VP3 889 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 SLC13A5Q86YT5 568 aaPredicted RBP19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 CCDC105Q8IYK2 499 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 GPRASP2Q96D09 838 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 SENP7Q9BQF6 1050 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 PLVAPQ9BX97 442 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 GGA2Q9UJY4 613 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 RGPD3A6NKT7 1758 aaPredicted RBP19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 RGPD4Q7Z3J3 1758 aa19.25■□□□□ 0.67
CCHCR1-228ENST00000509552 MAFGO15525 162 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 DPEP1P16444 411 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 TMOD1P28289 359 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 CYP24A1Q07973 514 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 ACAD10Q6JQN1 1059 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 FBXL18Q96ME1 805 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 GRHL1Q9NZI5 618 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 GABBR1Q9UBS5 961 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 TRAPPC3O43617 180 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 DLATP10515 647 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 CYP1B1Q16678 543 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 TTC27Q6P3X3 843 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 ENOSF1Q7L5Y1 443 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 YTHDF3Q7Z739 585 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 GPD1LQ8N335 351 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 BTBD6Q96KE9 485 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 TOPORSQ9NS56 1045 aaPredicted RBP19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 RNF146Q9NTX7 359 aa19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 TNS1Q9HBL0 1735 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-228ENST00000509552 VWA5AO00534 786 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 KRT5P13647 590 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 COILP38432 576 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 RPL21P46778 160 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 BYSLQ13895 437 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 BAATQ14032 418 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 SV2AQ7L0J3 742 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 CROCCP2Q86T23 111 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 VSIG10LQ86VR7 867 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 BSNDQ8WZ55 320 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 TLCD1Q96CP7 247 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 FAM81BQ96LP2 452 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 TEPSINQ96N21 525 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 CNOT8Q9UFF9 292 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 HNRNPDLO14979 420 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 NR3C2P08235 984 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 PAEPP09466 180 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 FNTAP49354 379 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 ENPEPQ07075 957 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 ZDHHC14Q8IZN3 488 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 MCPH1Q8NEM0 835 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 CYFIP2Q96F07 1278 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 BICD1Q96G01 975 aa19.23■□□□□ 0.67
CCHCR1-228ENST00000509552 DCDC2CA8MYV0 355 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 CAND2O75155 1236 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 KCNA3P22001 575 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 GARTP22102 1010 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 GCNT1Q02742 428 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 SLMAPQ14BN4 828 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 SLC39A4Q6P5W5 647 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 DDX1Q92499 740 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 IFT74Q96LB3 600 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 EPB41L4BQ9H329 900 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 CNOT7Q9UIV1 285 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 ZC3H11AO75152 810 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 DGAT1O75907 488 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 SHBGP04278 402 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 PSAPP07602 524 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 CLEC16AQ2KHT3 1053 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 CYFIP1Q7L576 1253 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 ARMC9Q7Z3E5 817 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 DHX38Q92620 1227 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 TATDN2Q93075 761 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 PGM2Q96G03 612 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 FAM129AQ9BZQ8 928 aa19.22■□□□□ 0.67
CCHCR1-228ENST00000509552 H0YCG3 227 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 RARAP10276 462 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms