RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 CLDN10P78369 228 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 IRX3P78415 501 aaPredicted RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 GCNT1Q02742 428 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF211Q13398 564 aaPredicted RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 NEDD9Q14511 834 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 RASA2Q15283 850 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 CCDC142Q17RM4 750 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 PPP1R2P3Q6NXS1 205 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 SPIRE2Q8WWL2 714 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 C17orf75Q9HAS0 396 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ATP6V0A4Q9HBG4 840 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 TMEM8AQ9HCN3 771 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 TMOD4Q9NZQ9 345 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 PRKAG3Q9UGI9 489 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 TPX2Q9ULW0 747 aaKnown RBP9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 ARID2Q68CP9 1835 aa9.9□□□□□ -0.82
PDGFRA-208ENST00000509490 A0A1B0GUA9 196 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 ECEL1O95672 775 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 MXI1P50539 228 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 RTP1P59025 263 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 ELF3P78545 371 aaPredicted RBP9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 ACVR2BQ13705 512 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 SPDYAQ5MJ70 313 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 TLDC1Q6P9B6 456 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 EXOC3L1Q86VI1 746 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 MAP4K3Q8IVH8 894 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 RIBC1Q8N443 379 aaPredicted RBP9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 BBOF1Q8ND07 529 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 MDM1Q8TC05 714 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 ZNF526Q8TF50 670 aaPredicted RBP9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 GRK7Q8WTQ7 553 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 SENP7Q9BQF6 1050 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 POLD4Q9HCU8 107 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 HAUS2Q9NVX0 235 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 EXOC7Q9UPT5 735 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 SMCHD1A6NHR9 2005 aa9.9□□□□□ -0.83
PDGFRA-208ENST00000509490 ADGRA3Q8IWK6 1321 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 K7ENM7 598 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 SLURP2P0DP57 97 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 CYP11B1P15538 503 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 IFI35P80217 286 aaPredicted RBP9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 PCNX4Q63HM2 1172 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 C15orf39Q6ZRI6 1047 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 RGS9BPQ6ZS82 235 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 TRPM8Q7Z2W7 1104 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 LRRC34Q8IZ02 419 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 SYCP3Q8IZU3 236 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 MAF1Q9H063 256 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 SAMD15Q9P1V8 674 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 ZBTB39O15060 712 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 GDF11O95390 407 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 SGPL1O95470 568 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 UNGP13051 313 aaPredicted RBP9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 ITGB5P18084 799 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 MAP2K2P36507 400 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 SNAP25P60880 206 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 CLEC16AQ2KHT3 1053 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 KRT39Q6A163 491 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 CKAP2Q8WWK9 683 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 NUP85Q9BW27 656 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 AGO4Q9HCK5 861 aaKnown RBP9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 TBC1D22BQ9NU19 505 aa9.89□□□□□ -0.83
PDGFRA-208ENST00000509490 MAGEB2O15479 319 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 RAD21O60216 631 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 ECE2O60344 883 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 TTC4O95801 387 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 ICAM1P05362 532 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 QARSP47897 775 aaKnown RBP9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 KLF1Q13351 362 aaPredicted RBP9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 PRPF4BQ13523 1007 aaKnown RBP9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 VSTM1Q6UX27 236 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 KSR1Q8IVT5 923 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 FLAD1Q8NFF5 587 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 CFAP61Q8NHU2 1237 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 KIFAP3Q92845 792 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 AKT1S1Q96B36 256 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 GRAMD1AQ96CP6 724 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 SNF8Q96H20 258 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 UIMC1Q96RL1 719 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 PHACTR1Q9C0D0 580 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 TMX4Q9H1E5 349 aaPredicted RBP9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 PPCSQ9HAB8 311 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 ZBTB21Q9ULJ3 1066 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 ZHX2Q9Y6X8 837 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 LRRN2O75325 713 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 BNIP1Q12981 228 aa9.88□□□□□ -0.83
PDGFRA-208ENST00000509490 TNIP1Q15025 636 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms