RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 TMEM9BQ9NQ34 198 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.04
HMGCR-208ENST00000509431 FAM221BA6H8Z2 402 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 F8W810 466 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 CAPNS1P04632 268 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 RHOP08100 348 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 PRKCEQ02156 737 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 DRP2Q13474 957 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 AXDND1Q5T1B0 1012 aaPredicted RBP15.27■□□□□ 0.04
HMGCR-208ENST00000509431 KIAA1211LQ6NV74 962 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 PDXDC1Q6P996 788 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 PRSS55Q6UWB4 352 aaPredicted RBP15.27■□□□□ 0.04
HMGCR-208ENST00000509431 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 ZNF577Q9BSK1 485 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
HMGCR-208ENST00000509431 KLK13Q9UKR3 277 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 SAMM50Q9Y512 469 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.04
HMGCR-208ENST00000509431 ARL5CA6NH57 179 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 H0Y626 953 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 ZNF263O14978 683 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 ZNF862O60290 1169 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 TRIM16O95361 564 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 SEC24BO95487 1268 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 CAVIN2O95810 425 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 FGD1P98174 961 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 SETQ01105 290 aaPredicted RBP15.26■□□□□ 0.03
HMGCR-208ENST00000509431 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 TARBP2Q15633 366 aaKnown RBP15.26■□□□□ 0.03
HMGCR-208ENST00000509431 PSMD5Q16401 504 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 RTP2Q5QGT7 225 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 Q6ZS52 159 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 RILPL2Q969X0 211 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 TTPALQ9BTX7 342 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 SLC32A1Q9H598 525 aa15.26■□□□□ 0.03
HMGCR-208ENST00000509431 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
HMGCR-208ENST00000509431 ASCC3Q8N3C0 2202 aaKnown RBP15.26■□□□□ 0.03
HMGCR-208ENST00000509431 ACACAQ13085 2346 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 LAMA1P25391 3075 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 IGKV6-21A0A0C4DH24 114 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 LNP1A1A4G5 178 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 WDR64B1ANS9 1081 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 TADA2AO75478 443 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 RHOBTB1O94844 696 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 MICAL2O94851 1124 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 CEBPBP17676 345 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 ELF2Q15723 593 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 SLC5A9Q2M3M2 681 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 PLK5Q496M5 336 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 UBXN11Q5T124 520 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
HMGCR-208ENST00000509431 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 ZNF654Q8IZM8 581 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 SRBD1Q8N5C6 995 aaKnown RBP15.25■□□□□ 0.03
HMGCR-208ENST00000509431 CSGALNACT1Q8TDX6 532 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 ASB16Q96NS5 453 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 GAD1Q99259 594 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 RIC8AQ9NPQ8 531 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 SUCLA2Q9P2R7 463 aaPredicted RBP15.25■□□□□ 0.03
HMGCR-208ENST00000509431 NUP205Q92621 2012 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 EML5Q05BV3 1969 aa15.25■□□□□ 0.03
HMGCR-208ENST00000509431 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 BCLAF3A2AJT9 711 aaKnown RBP15.24■□□□□ 0.03
HMGCR-208ENST00000509431 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 ZNF197O14709 1029 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 PTPN2P17706 415 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 MLH1P40692 756 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 SCNN1GP51170 649 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 RAB33AQ14088 237 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 FAM78AQ5JUQ0 283 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 VITQ6UXI7 678 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 HEATR3Q7Z4Q2 680 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 RALYLQ86SE5 291 aaKnown RBP15.24■□□□□ 0.03
HMGCR-208ENST00000509431 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 LNX1Q8TBB1 728 aaPredicted RBP15.24■□□□□ 0.03
HMGCR-208ENST00000509431 NLRP4Q96MN2 994 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 GLT8D2Q9H1C3 349 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 C2orf42Q9NWW7 574 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 ASXL3Q9C0F0 2248 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 BPTFQ12830 3046 aa15.24■□□□□ 0.03
HMGCR-208ENST00000509431 HIP1O00291 1037 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 KHNYNO15037 678 aaKnown RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 CREB5Q02930 508 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 HACE1Q8IYU2 909 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 SMG8Q8ND04 991 aaKnown RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 FAM200AQ8TCP9 573 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 SMARCD2Q92925 531 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 JPH2Q9BR39 696 aaPredicted RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 NIFKQ9BYG3 293 aaKnown RBP15.23■□□□□ 0.03
HMGCR-208ENST00000509431 IFT122Q9HBG6 1241 aa15.23■□□□□ 0.03
HMGCR-208ENST00000509431 SCUBE2Q9NQ36 999 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms