RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 STK17AQ9UEE5 414 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 RCOR1Q9UKL0 485 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 GDAQ9Y2T3 454 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 IRAK3Q9Y616 596 aa17.72■□□□□ 0.43
PDLIM5-212ENST00000509333 RECQL4O94761 1208 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 GLP2RO95838 553 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 OR1G1P47890 313 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 NAB2Q15742 525 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 PTCRAQ6ISU1 281 aaPredicted RBP17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 CCDC73Q6ZRK6 1079 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 SV2BQ7L1I2 683 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 TAS1R1Q7RTX1 841 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 TCHPQ9BT92 498 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 CDT1Q9H211 546 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 PARVGQ9HBI0 331 aa17.71■□□□□ 0.43
PDLIM5-212ENST00000509333 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 MYMKA6NI61 221 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 TRAK2O60296 914 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 CUTAO60888 179 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 CLASP2O75122 1294 aaKnown RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 TBX10O75333 385 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 FAM13AO94988 1023 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 KRT18P05783 430 aaKnown RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 THP07101 528 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 MCF2P10911 925 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 GRM5P41594 1212 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 GRIK3Q13003 919 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 STRN3Q13033 797 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 BMS1Q14692 1282 aaKnown RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 APBB1IPQ7Z5R6 666 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 ZBTB33Q86T24 672 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 AUTS2Q8WXX7 1259 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 DNAJC19Q96DA6 116 aa17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 UHRF1Q96T88 793 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 PRG3Q9Y2Y8 225 aaPredicted RBP17.7■□□□□ 0.42
PDLIM5-212ENST00000509333 F8W810 466 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 H0YCG3 227 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 NR1I2O75469 434 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 TOM1L1O75674 476 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 IL9P15248 144 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 SCP2P22307 547 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 TXLNAP40222 546 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 GTF2BQ00403 316 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 DNM1Q05193 864 aaKnown RBP17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 COASYQ13057 564 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 TUSC3Q13454 348 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 KIAA0319Q5VV43 1072 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 SHC4Q6S5L8 630 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 MPZL3Q6UWV2 235 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 CEP120Q8N960 986 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 DDX12PQ92771 950 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 PAAF1Q9BRP4 392 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 HAPLN2Q9GZV7 340 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 STK39Q9UEW8 545 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 TBX20Q9UMR3 447 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 BDP1A6H8Y1 2624 aa17.69■□□□□ 0.42
PDLIM5-212ENST00000509333 SMIM28A0A1B0GU29 152 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 MBTPS2O43462 519 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 NMT1P30419 496 aaKnown RBP17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 NDUFV1P49821 464 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 ZNF720Q7Z2F6 126 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 FAM178BQ8IXR5 827 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 PDILTQ8N807 584 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 ACAP3Q96P50 834 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 RPS6KC1Q96S38 1066 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 GPR62Q9BZJ7 368 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 ST6GALNAC4Q9H4F1 302 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 CD207Q9UJ71 328 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
PDLIM5-212ENST00000509333 CLDN3O15551 220 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 SOD2P04179 222 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 IGFBP6P24592 240 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 OSTNP61366 133 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 MCL1Q07820 350 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 CLUL1Q15846 466 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 E2F4Q16254 413 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 ZNF568Q3ZCX4 644 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 KCNG4Q8TDN1 519 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 SLC22A17Q8WUG5 538 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 KLHL5Q96PQ7 755 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 PPP1R10Q96QC0 940 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 STRA6Q9BX79 667 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 S1PR5Q9H228 398 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 CD320Q9NPF0 282 aa17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 BARX2Q9UMQ3 279 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-212ENST00000509333 MYH11P35749 1972 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms