RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SUCLA2Q9P2R7 463 aaPredicted RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 DMGDHQ9UI17 866 aaKnown RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 CCDC151A5D8V7 595 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CLDN3O15551 220 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 ADCY3O60266 1144 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CEP104O60308 925 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 TNNT3P45378 269 aaPredicted RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 MFAP3P55082 362 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 SNRPFP62306 86 aaKnown RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 KIF22Q14807 665 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 ADAT2Q7Z6V5 191 aaKnown RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 ATP8B4Q8TF62 1192 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 AFG1LQ8WV93 481 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 BTBD6Q96KE9 485 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 NENFQ9UMX5 172 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 COG5Q9UP83 839 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 P4HA2O15460 535 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CCDC172P0C7W6 258 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CETPP11597 493 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 RFC5P40937 340 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 EFCAB12Q6NXP0 572 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 KLHL7Q8IXQ5 586 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 PTPN18Q99952 460 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 AP1M1Q9BXS5 423 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CTTNBP2NLQ9P2B4 639 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 UMODL1Q5DID0 1318 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
PHF3-209ENST00000509330 POLR3GO15318 223 aaPredicted RBP16.04■□□□□ 0.16
PHF3-209ENST00000509330 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 PLA2G4AP47712 749 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 C10orf76Q5T2E6 689 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 GINS2Q9Y248 185 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 MAPK13O15264 365 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 PHACTR2O75167 634 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 CHRNB2P17787 502 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 BEND6Q5SZJ8 279 aaPredicted RBP16.04■□□□□ 0.16
PHF3-209ENST00000509330 CPNE8Q86YQ8 564 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 LRRC57Q8N9N7 239 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 TMC2Q8TDI7 906 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
PHF3-209ENST00000509330 H0YCG3 227 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 KIF4AO95239 1232 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 PRKCBP05771 671 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 IRX5P78411 483 aaPredicted RBP16.03■□□□□ 0.16
PHF3-209ENST00000509330 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 USP37Q86T82 979 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 PASD1Q8IV76 773 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 FUT8Q9BYC5 575 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 MINDY3Q9H8M7 445 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 CYP11B1P15538 503 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 GPC3P51654 580 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 GTF2A2P52657 109 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 CCNA1P78396 465 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 BRD3Q15059 726 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 FAM71AQ8IYT1 594 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 LENG1Q96BZ8 264 aaPredicted RBP16.03■□□□□ 0.16
PHF3-209ENST00000509330 KRT12Q99456 494 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
PHF3-209ENST00000509330 RAB21Q9UL25 225 aa16.03■□□□□ 0.16
PHF3-209ENST00000509330 ASB14A6NK59 587 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 VTNP04004 478 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 INSRRP14616 1297 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 PDE6CP51160 858 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 ZNF211Q13398 564 aaPredicted RBP16.02■□□□□ 0.16
PHF3-209ENST00000509330 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 SHC3Q92529 594 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 FAM167AQ96KS9 214 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
PHF3-209ENST00000509330 NOCTQ9UK39 431 aaKnown RBP16.02■□□□□ 0.16
PHF3-209ENST00000509330 A0A0B4J269 797 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 MSCO60682 206 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 VNN1O95497 513 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 FMO1Q01740 532 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 ARHGAP1Q07960 439 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 ZNF394Q53GI3 561 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 ILDR2Q71H61 639 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 RFFLQ8WZ73 363 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 MTMR12Q9C0I1 747 aa16.02■□□□□ 0.16
PHF3-209ENST00000509330 APOBEC3GQ9HC16 384 aaKnown RBP16.02■□□□□ 0.16
PHF3-209ENST00000509330 ERLIN1O75477 346 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 LGALS2P05162 132 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 RFX1P22670 979 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 PSMD6Q15008 389 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 MAPK6Q16659 721 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 ZNF792Q3KQV3 632 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms