RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ANKRD20A1Q5TYW2 823 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD20A3Q5VUR7 823 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FBXL19Q6PCT2 694 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 LYPD8Q6UX82 237 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ISLR2Q6UXK2 745 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KCTD6Q8NC69 237 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KIF18AQ8NI77 898 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 NSUN5Q96P11 429 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GSDMAQ96QA5 445 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FAM126AQ9BYI3 521 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 OSBPL7Q9BZF2 842 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CYP4F11Q9HBI6 524 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 LGR6Q9HBX8 967 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PGPEP1Q9NXJ5 209 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KIF17Q9P2E2 1029 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 AKT3Q9Y243 479 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SPATA31A5Q5VU36 1347 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SPATA31A7Q8IWB4 1347 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ATRNO75882 1429 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RNF103-CHMP3A0A140T963 221 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TUBAL3A6NHL2 446 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RNF103O00237 685 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RGS10O43665 173 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 EFCAB14O75071 495 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SIN3BO75182 1162 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 USP1O94782 785 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TPPPO94811 219 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CPA3P15088 417 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RPS6KB1P23443 525 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CTNNA2P26232 953 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 UBA7P41226 1012 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ID4P47928 161 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PTK6Q13882 451 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PCBP1Q15365 356 aaKnown RBP eCLIP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 MAP1SQ66K74 1059 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KLC3Q6P597 504 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 B4GALNT4Q76KP1 1039 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RRAGAQ7L523 313 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SH3RF1Q7Z6J0 888 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 DEPTORQ8TB45 409 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RSRP1Q9BUV0 290 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 MRPL11Q9Y3B7 192 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 IPPQ9Y573 584 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 LRRIQ4A6NIV6 560 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PIP5K1BO14986 540 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CETN3O15182 167 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 AKR1B10O60218 316 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 DGKIO75912 1065 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 YEATS4O95619 227 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CNOT4O95628 575 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 F13A1P00488 732 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FTLP02792 175 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GAP43P17677 238 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TIE1P35590 1138 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GNL1P36915 607 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 HARS2P49590 506 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF674Q2M3X9 581 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FAM180AQ6UWF9 173 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 LDHAL6AQ6ZMR3 332 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 LRRC69Q6ZNQ3 347 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ADCK2Q7Z695 626 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 DENND1CQ8IV53 801 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 NOSTRINQ8IVI9 506 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FAM13CQ8NE31 585 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PLBD2Q8NHP8 589 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SSH3Q8TE77 659 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KCNN1Q92952 543 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 EXOC2Q96KP1 924 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GPAMQ9HCL2 828 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PALMDQ9NP74 551 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ADPRHL2Q9NX46 363 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 BLOC1S6Q9UL45 172 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TNNQ9UQP3 1299 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 WDR37Q9Y2I8 494 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TRAF6Q9Y4K3 522 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TTC41PQ6P2S7 1318 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 M0R3H8 397 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TRIM38O00635 465 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 APOL1O14791 398 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 UBTFL1P0CB47 393 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RARAP10276 462 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ACADMP11310 421 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CCNCP24863 283 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GRK6P43250 576 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 POU4F3Q15319 338 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SYT16Q17RD7 645 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PROX2Q3B8N5 592 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 BOLA3Q53S33 107 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CDH24Q86UP0 819 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC112Q8NEF3 446 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 VPS33AQ96AX1 596 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 METTL22Q9BUU2 404 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TRIM7Q9C029 511 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 QRSL1Q9H0R6 528 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 KCND1Q9NSA2 647 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 A0A1W2PPH5 198 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ARSDP51689 593 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TMEM132BQ14DG7 1078 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 UGP2Q16851 508 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms