RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 HARSP12081 509 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 ITGA4P13612 1032 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 OSTNP61366 133 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 GAD1Q99259 594 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 RAD9AQ99638 391 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 TRANK1O15050 2925 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 BRWD1Q9NSI6 2320 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 PDXKO00764 312 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 OGTO15294 1046 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 DDHD2O94830 711 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 CA3P07451 260 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 CXCL8P10145 99 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 GARTP22102 1010 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 ABCD1P33897 745 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 MLH1P40692 756 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 ACOT2P49753 483 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 PAN2Q504Q3 1202 aaKnown RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 SYCP3Q8IZU3 236 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 CWH43Q9H720 699 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 HSPBP1Q9NZL4 362 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 EXOC7Q9UPT5 735 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
PTPN20-220ENST00000508715 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
PTPN20-220ENST00000508715 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 LINC01553A4QN01 128 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TLL1O43897 1013 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 POMCP01189 267 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 SKIP12755 728 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CASP4P49662 377 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 SCNN1GP51170 649 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TAP1Q03518 808 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CAVIN1Q6NZI2 390 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CBWD2Q8IUF1 395 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 CCDC47Q96A33 483 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 SNX27Q96L92 541 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-220ENST00000508715 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
PTPN20-220ENST00000508715 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms