RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 UBE3AQ05086 875 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 EHHADHQ08426 723 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 SNW1Q13573 536 aaKnown RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 ZC2HC1CQ53FD0 456 aaPredicted RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 CD302Q8IX05 232 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 ENGASEQ8NFI3 743 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 POMGNT1Q8WZA1 660 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 LPPQ93052 612 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 ZNF558Q96NG5 402 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 GSDMAQ96QA5 445 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 GAD1Q99259 594 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 TMEM175Q9BSA9 504 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 MSTO1Q9BUK6 570 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 STRA6Q9BX79 667 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 GBP3Q9H0R5 595 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 LMAN2LQ9H0V9 348 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 TTYH1Q9H313 450 aaPredicted RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 TYW1Q9NV66 732 aaKnown RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 TBC1D13Q9NVG8 400 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 HES2Q9Y543 173 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 MRPL42Q9Y6G3 142 aaKnown RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 A0A0B4J269 797 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 H3BNC9 293 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 ZC3H11AO75152 810 aaKnown RBP eCLIP9.97□□□□□ -0.81
NUP54-207ENST00000508583 PRPF40AO75400 957 aaKnown RBP9.97□□□□□ -0.81
NUP54-207ENST00000508583 RHOBTB3O94955 611 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 THP07101 528 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 MYBP10242 640 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
NUP54-207ENST00000508583 AKAP5P24588 427 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 PPP2R3AQ06190 1150 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 DPYDQ12882 1025 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 STIM1Q13586 685 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 KNOP1Q1ED39 458 aaKnown RBP9.97□□□□□ -0.81
NUP54-207ENST00000508583 BMT2Q1RMZ1 405 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 KMT5BQ4FZB7 885 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 EEF1DP3Q658K8 133 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 ARMCX5Q6P1M9 558 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 KCNT2Q6UVM3 1135 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 SPRED2Q7Z698 418 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 THNSL1Q8IYQ7 743 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 GRAMD1CQ8IYS0 662 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 COLGALT1Q8NBJ5 622 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 PPP2R3CQ969Q6 453 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 TMEM169Q96HH4 297 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 C17orf80Q9BSJ5 609 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 RPF1Q9H9Y2 349 aaKnown RBP9.97□□□□□ -0.81
NUP54-207ENST00000508583 KIAA1586Q9HCI6 787 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 RNF19AQ9NV58 838 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 MTMR10Q9NXD2 777 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 SNTG2Q9NY99 539 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 AGO2Q9UKV8 859 aaKnown RBP9.97□□□□□ -0.81
NUP54-207ENST00000508583 MTUS1Q9ULD2 1270 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 LZTS1Q9Y250 596 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 GDAQ9Y2T3 454 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 STYXL1Q9Y6J8 313 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 KIAA1671Q9BY89 1806 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 CITO14578 2027 aa9.97□□□□□ -0.81
NUP54-207ENST00000508583 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
NUP54-207ENST00000508583 ABLIM1O14639 778 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.82
NUP54-207ENST00000508583 IL18RAPO95256 599 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 POMCP01189 267 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 ALDH2P05091 517 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 EDN1P05305 212 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 FOSL2P15408 326 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 PTMSP20962 102 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 GATMP50440 423 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 CASP5P51878 434 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 BCAR1P56945 870 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 TUSC3Q13454 348 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 GPM6BQ13491 265 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 GRIN2CQ14957 1233 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 TIGD5Q53EQ6 642 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 PDE12Q6L8Q7 609 aaKnown RBP9.96□□□□□ -0.82
NUP54-207ENST00000508583 EPM2AIP1Q7L775 607 aaPredicted RBP9.96□□□□□ -0.82
NUP54-207ENST00000508583 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
NUP54-207ENST00000508583 UROC1Q96N76 676 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 PRDM12Q9H4Q4 367 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 CWH43Q9H720 699 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 CERS4Q9HA82 394 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
NUP54-207ENST00000508583 TRANK1O15050 2925 aa9.95□□□□□ -0.82
NUP54-207ENST00000508583 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
NUP54-207ENST00000508583 KLRC4O43908 158 aa9.95□□□□□ -0.82
NUP54-207ENST00000508583 EXTL3O43909 919 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms