RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 STPG3Q8N7X2 389 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 DTX3Q8N9I9 347 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 DEPTORQ8TB45 409 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 IPCEF1Q8WWN9 437 aaPredicted RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SH3KBP1Q96B97 665 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 RSRC1Q96IZ7 334 aaKnown RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 UBXN10Q96LJ8 280 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 ADOQ96SZ5 270 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 TBCBQ99426 244 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 NUP88Q99567 741 aaPredicted RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 XPO4Q9C0E2 1151 aaKnown RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 CDIP1Q9H305 208 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 ATP6V0A4Q9HBG4 840 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 AGO4Q9HCK5 861 aaKnown RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 ZFR2Q9UPR6 939 aaKnown RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA9Q9Y5G4 932 aaKnown RBP4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA8Q9Y5G5 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA7Q9Y5G6 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA6Q9Y5G7 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA3Q9Y5H0 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA2Q9Y5H1 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SNX5Q9Y5X3 404 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SYNRGQ9UMZ2 1314 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 RRN3P2A6NIE6 340 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 TRIM75PA6NK02 468 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 CHL1O00533 1208 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 PQBP1O60828 265 aaKnown RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 ZBED1O96006 694 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 KNG1P01042 644 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 ENO2P09104 434 aaPredicted RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 C6orf222P0C671 652 aaPredicted RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 GYS1P13807 737 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 HSPA6P17066 643 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 GRIA2P42262 883 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SNX16P57768 344 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 KRT83P78385 493 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 LLGL1Q15334 1064 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SKIDA1Q1XH10 827 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC35F1Q5T1Q4 408 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 CYP4F22Q6NT55 531 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 HIBCHQ6NVY1 386 aaPredicted RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 PLBD1Q6P4A8 553 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 BRINP3Q76B58 766 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 FASTKD5Q7L8L6 764 aaKnown RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 C11orf74Q86VG3 221 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 C1orf162Q8NEQ5 155 aaPredicted RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 OR2W6PQ8NHA6 318 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 HDAC2Q92769 488 aaKnown RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 CCDC34Q96HJ3 373 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SCLYQ96I15 445 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 IPO9Q96P70 1041 aaKnown RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC26A6Q9BXS9 759 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 MYLK2Q9H1R3 596 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC52A2Q9HAB3 445 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 NMRK2Q9NPI5 230 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 NKIRAS2Q9NYR9 191 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 ARHGAP20Q9P2F6 1191 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 PPARGC1AQ9UBK2 798 aaKnown RBP4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 NDOR1Q9UHB4 597 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 ZFP69BQ9UJL9 534 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 NPFFR2Q9Y5X5 522 aa4.98□□□□□ -1.61
SMARCA5-202ENST00000508573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TRIM64CA6NLI5 447 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 MSCO60682 206 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 IL33O95760 270 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 FAHP16930 419 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 RPS6KB1P23443 525 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 CSF2RBP32927 897 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ADCYAP1R1P41586 468 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ZNF131P52739 623 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 BPIFB3P59826 476 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 KLF1Q13351 362 aaPredicted RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TUSC3Q13454 348 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ZNF267Q14586 743 aaPredicted RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 PAN2Q504Q3 1202 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 USP39Q53GS9 565 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 RRP12Q5JTH9 1297 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 IFIT1BQ5T764 474 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ZCCHC8Q6NZY4 707 aaKnown RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ZNF449Q6P9G9 518 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 UBE2Q1Q7Z7E8 422 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TTC30AQ86WT1 665 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ARL10Q8N8L6 244 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 FAM156AQ8NDB6 213 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TTLL11Q8NHH1 800 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 EXTL1Q92935 676 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 OSBP2Q969R2 916 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TBC1D31Q96DN5 1066 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 C1orf159Q96HA4 380 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 KCNJ15Q99712 375 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 FAM167BQ9BTA0 163 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 TOPORSQ9NS56 1045 aaPredicted RBP4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 CEP72Q9P209 647 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 GIMAP2Q9UG22 337 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms