RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SPATA1Q5VX52 437 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 ISM2Q6H9L7 571 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 SLC24A5Q71RS6 500 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 FILIP1Q7Z7B0 1213 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 DBF4BQ8NFT6 615 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 FAM200AQ8TCP9 573 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 DUSP9Q99956 384 aaKnown RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 OSBPL7Q9BZF2 842 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 PLEKHA5Q9HAU0 1116 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 IL23AQ9NPF7 189 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 UBN1Q9NPG3 1134 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 CPSF3Q9UKF6 684 aaKnown RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 MAPK8IP1Q9UQF2 711 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 PIN4Q9Y237 131 aaKnown RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 NR2E3Q9Y5X4 410 aa9.43□□□□□ -0.9
USP46-207ENST00000508499 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
USP46-207ENST00000508499 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 CETN3O15182 167 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 EXTL3O43909 919 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 NR2F2P24468 414 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 FPGSQ05932 587 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 ADAM9Q13443 819 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 IKBKEQ14164 716 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 NCAPHQ15003 741 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 ZNF568Q3ZCX4 644 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 CDKAL1Q5VV42 579 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 PSRC1Q6PGN9 363 aaPredicted RBP9.42□□□□□ -0.9
USP46-207ENST00000508499 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
USP46-207ENST00000508499 NT5DC4Q86YG4 428 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 CD302Q8IX05 232 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 NELFCDQ8IXH7 590 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 GPD1LQ8N335 351 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 CSGALNACT2Q8N6G5 542 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 BICD1Q96G01 975 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 BORCS6Q96GS4 357 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 ZNF668Q96K58 619 aaPredicted RBP9.42□□□□□ -0.9
USP46-207ENST00000508499 PPP1R16BQ96T49 567 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 CDT1Q9H211 546 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 TSPY26PQ9H489 355 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 THAP9Q9H5L6 903 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
USP46-207ENST00000508499 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 HSPBP1Q9NZL4 362 aa9.42□□□□□ -0.9
USP46-207ENST00000508499 AGO2Q9UKV8 859 aaKnown RBP9.42□□□□□ -0.9
USP46-207ENST00000508499 PMM2O15305 246 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 MGEA5O60502 916 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 CLTAP09496 248 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 ACTN1P12814 892 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 CSF2RAP15509 400 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 ZNF18P17022 549 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 PSMC2P35998 433 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 CCL23P55773 120 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 NFX1Q12986 1120 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 SURF1Q15526 300 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 SNRNP35Q16560 246 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 RASIP1Q5U651 963 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 EEF1DP3Q658K8 133 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 CRELD2Q6UXH1 353 aaPredicted RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 ALKAL1Q6UXT8 129 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 INTS8Q75QN2 995 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 FRMD5Q7Z6J6 570 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 USP37Q86T82 979 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 RTN4RL1Q86UN2 441 aaPredicted RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 IRF2BP1Q8IU81 584 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 FAM114A1Q8IWE2 563 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 DHX40Q8IX18 779 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 HACE1Q8IYU2 909 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 C7orf61Q8IZ16 206 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 PGBD4Q96DM1 585 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 SCLYQ96I15 445 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 CPB2Q96IY4 423 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 MFSD14AQ96MC6 490 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 ADAM2Q99965 735 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 CBWD1Q9BRT8 395 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 MSTO1Q9BUK6 570 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 HSD3B7Q9H2F3 369 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 ASB7Q9H672 318 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
USP46-207ENST00000508499 TMEM161AQ9NX61 479 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 CTNND2Q9UQB3 1225 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 GIT1Q9Y2X7 761 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 DERAQ9Y315 318 aa9.41□□□□□ -0.9
USP46-207ENST00000508499 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.4□□□□□ -0.9
USP46-207ENST00000508499 TTC26A0AVF1 554 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 TRIM49BA6NDI0 452 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 ZNF233A6NK53 670 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms