RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 IER5LQ5T953 404 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 C15orf39Q6ZRI6 1047 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PRSS33Q8NF86 280 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 SNX29Q8TEQ0 813 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 RABGGTAQ92696 567 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 COLEC11Q9BWP8 271 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 SNTG2Q9NY99 539 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 KIAA1024Q9UPX6 916 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 DOCK8Q8NF50 2099 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PP2D1A8MPX8 630 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 PDGFBP01127 241 aaPredicted RBP14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 VCPP55072 806 aaKnown RBP14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 TUSC3Q13454 348 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 HSP90AA2PQ14568 343 aaPredicted RBP14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 RABEP1Q15276 862 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 NAB2Q15742 525 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 IL17AQ16552 155 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 EEF1DP3Q658K8 133 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 UBALD2Q8IYN6 164 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 CMASQ8NFW8 434 aaPredicted RBP14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 DEPTORQ8TB45 409 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 RHOBTB2Q9BYZ6 727 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 DDX19AQ9NUU7 478 aaKnown RBP14.35□□□□□ -0.11
HMGCS1-205ENST00000508319 DMDP11532 3685 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 LAD1O00515 517 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 RFPL2O75678 378 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 KIF4AO95239 1232 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 PAPLNO95428 1278 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 LIG1P18858 919 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 EFNA5P52803 228 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 TMEM132AQ24JP5 1023 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 ADPGKQ9BRR6 497 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 LIMD1Q9UGP4 676 aa14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 SF3B1O75533 1304 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGCS1-205ENST00000508319 E9PMD0 336 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 TGM5O43548 720 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 RPL17P18621 184 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 PRPHP41219 470 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 TCF15Q12870 199 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 DCAF4L1Q3SXM0 396 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 RTP2Q5QGT7 225 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 ATF7IP2Q5U623 682 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 OTOP3Q7RTS5 596 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 ALYREFQ86V81 257 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 DAW1Q8N136 415 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 ZNF707Q96C28 371 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 ACSF2Q96CM8 615 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 IFT74Q96LB3 600 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 RUSC1Q9BVN2 902 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 FNIP2Q9P278 1114 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 DPP7Q9UHL4 492 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 GDAQ9Y2T3 454 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 PHLPP2Q6ZVD8 1323 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 MYH11P35749 1972 aa14.33□□□□□ -0.12
HMGCS1-205ENST00000508319 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 ST18O60284 1047 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 HIP1RO75146 1068 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 TADA2AO75478 443 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 C1RP00736 705 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 THP07101 528 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 SPATA31D3P0C874 917 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 MYBP10242 640 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 CDC25AP30304 524 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 NPTX2P47972 431 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 MRE11P49959 708 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 CREMQ03060 361 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 MAPK7Q13164 816 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 KRT79Q5XKE5 535 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 LILRA6Q6PI73 481 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 ELMSAN1Q6PJG2 1045 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 PRSS55Q6UWB4 352 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 SPATA31D4Q6ZUB0 917 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 TAS1R3Q7RTX0 852 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 KCNK18Q7Z418 384 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 PALB2Q86YC2 1186 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 GLYCTKQ8IVS8 523 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 TMX3Q96JJ7 454 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 PRRX2Q99811 253 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 WDR6Q9NNW5 1121 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms