RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 GALNT8Q9NY28 637 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 SUCLA2Q9P2R7 463 aaPredicted RBP13.57□□□□□ -0.24
DDR1-262ENST00000508312 A0A1W2PRG0 241 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 E7ENQ6 273 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 F5H6K3 240 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 KIAA0391O15091 583 aaKnown RBP13.57□□□□□ -0.24
DDR1-262ENST00000508312 DBN1Q16643 649 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 SCG3Q8WXD2 468 aaKnown RBP13.57□□□□□ -0.24
DDR1-262ENST00000508312 SEC14L1Q92503 715 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 MMADHCQ9H3L0 296 aaPredicted RBP13.57□□□□□ -0.24
DDR1-262ENST00000508312 AJAP1Q9UKB5 411 aaPredicted RBP13.57□□□□□ -0.24
DDR1-262ENST00000508312 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
DDR1-262ENST00000508312 PFDN1O60925 122 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 CYP11B2P19099 503 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 MAPK7Q13164 816 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 COG2Q14746 738 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 MYLK4Q86YV6 388 aaPredicted RBP13.56□□□□□ -0.24
DDR1-262ENST00000508312 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 RASGEF1CQ8N431 466 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 ACER1Q8TDN7 264 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 PDGFDQ9GZP0 370 aaPredicted RBP13.56□□□□□ -0.24
DDR1-262ENST00000508312 DNAAF2Q9NVR5 837 aaKnown RBP13.56□□□□□ -0.24
DDR1-262ENST00000508312 PPP1R9AQ9ULJ8 1098 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 EML1O00423 815 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 MEIS2O14770 477 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 LRRN2O75325 713 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 NDUFB10O96000 172 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 SNHG28P0DPA3 235 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 ZNF76P36508 570 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 VHLP40337 213 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 ARHGAP4P98171 946 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 MCL1Q07820 350 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 ZRSR2Q15696 482 aaKnown RBP13.56□□□□□ -0.24
DDR1-262ENST00000508312 ANKLE1Q8NAG6 615 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 CKAP2Q8WWK9 683 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 DTNBP1Q96EV8 351 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 REEP2Q9BRK0 252 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 AIPL1Q9NZN9 384 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
DDR1-262ENST00000508312 GCNT3O95395 438 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 POU5F1Q01860 360 aaKnown RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 RFX8Q6ZV50 586 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 NCAPG2Q86XI2 1143 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 RUSC1Q9BVN2 902 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 PFASO15067 1338 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 MYH4Q9Y623 1939 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 BHMG1C9JSJ3 638 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 MPP2Q14168 576 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 TMEM119Q4V9L6 283 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 KHDC1Q4VXA5 237 aaKnown RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 SPDYCQ5MJ68 293 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 TPH2Q8IWU9 490 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 PRMT6Q96LA8 375 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 DCLRE1BQ9H816 532 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 CAPN9O14815 690 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 GFPT2O94808 682 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 GSTA2P09210 222 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 SKIV2L2P42285 1042 aaKnown RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 GALCP54803 685 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 PDIA5Q14554 519 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 PARP6Q2NL67 630 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 CGB2Q6NT52 195 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 CCDC65Q8IXS2 484 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
DDR1-262ENST00000508312 FBXO28Q9NVF7 368 aa13.55□□□□□ -0.24
DDR1-262ENST00000508312 PVALEFA0A1B0GWK0 134 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 FAM187AA6NFU0 413 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 TISP43B9A030 160 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ZSCAN9O15535 394 aaPredicted RBP13.54□□□□□ -0.24
DDR1-262ENST00000508312 COQ9O75208 318 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 RAD17O75943 681 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 NMT1P30419 496 aaKnown RBP13.54□□□□□ -0.24
DDR1-262ENST00000508312 KCNJ1P48048 391 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CALCOCO2Q13137 446 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms