RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SRRM1Q8IYB3 904 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 SNX33Q8WV41 574 aa6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 CEP95Q96GE4 821 aa6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 SEMA4GQ9NTN9 838 aa6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 THG1LQ9NWX6 298 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 PRSS50Q9UI38 385 aa6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 PPP2R3BQ9Y5P8 575 aa6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC13-209ENST00000508304 LCHNA4D1U4 455 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 PRAMEF4O60810 478 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 C1QL1O75973 258 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 SIM1P81133 766 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 PABPC4Q13310 644 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 ZNF610Q8N9Z0 462 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 ZFP28Q8NHY6 868 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 MDM1Q8TC05 714 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 RSAD2Q8WXG1 361 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 WNT8AQ9H1J5 351 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 GPRC5DQ9NZD1 345 aa6.21□□□□□ -1.42
TRAPPC13-209ENST00000508304 FAM83GA6ND36 823 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 DRGXA6NNA5 263 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 GASTP01350 101 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 ELANEP08246 267 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 CHN2P52757 468 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 BMS1Q14692 1282 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 MFSD14BQ5SR56 506 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 RHOT2Q8IXI1 618 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 Q96MF0 132 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 MTFR1LQ9H019 292 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 USP35Q9P2H5 1018 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 CDK11AQ9UQ88 783 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 ATP11BQ9Y2G3 1177 aa6.2□□□□□ -1.42
TRAPPC13-209ENST00000508304 MGST3O14880 152 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 KPNA6O60684 536 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 POU3F2P20265 443 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 RARRES1P49788 294 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 MANFP55145 182 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 TRIM25Q14258 630 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 OR56A1Q8NGH5 318 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 UBXN4Q92575 508 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 ZSWIM4Q9H7M6 989 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 KIAA1586Q9HCI6 787 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 SHROOM4Q9ULL8 1493 aa6.19□□□□□ -1.42
TRAPPC13-209ENST00000508304 PJA2O43164 708 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 LSP1P33241 339 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 FLT3LGP49771 235 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 KPNA1P52294 538 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 PRAMEF14Q5SWL7 426 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 B3GNTL1Q67FW5 361 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 Q6ZNX1 250 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 PDZD4Q76G19 769 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 MAPKAPK5Q8IW41 473 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 TMEM132CQ8N3T6 1108 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 OR14C36Q8NHC7 312 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 SLC35B2Q8TB61 432 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 ZNF384Q8TF68 577 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 KANSL2Q9H9L4 492 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 FOXJ2Q9P0K8 574 aa6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 ARHGEF17Q96PE2 2063 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-209ENST00000508304 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 PROB1E7EW31 1015 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 CTSSP25774 331 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 CRHR1P34998 444 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 TERF2Q15554 542 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 ATXN7L2Q5T6C5 722 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 SMC1BQ8NDV3 1235 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 RNF7Q9UBF6 113 aa6.17□□□□□ -1.42
TRAPPC13-209ENST00000508304 LRRC3CA6NJW4 275 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 ASMTLO95671 621 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 CACNA2D1P54289 1103 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 CLRN1P58418 232 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 SPDYE7PQ495Y7 208 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 FAM47AQ5JRC9 791 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 ARHGEF25Q86VW2 580 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 ZNF480Q8WV37 535 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 PDLIM2Q96JY6 352 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 ALOXE3Q9BYJ1 711 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 ANO3Q9BYT9 981 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 TMEM260Q9NX78 707 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 CDY2AQ9Y6F7 541 aa6.16□□□□□ -1.42
TRAPPC13-209ENST00000508304 PROP1O75360 226 aa6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 NEK4P51957 841 aa6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 FRMD7Q6ZUT3 714 aa6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 SMG7Q92540 1137 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
TRAPPC13-209ENST00000508304 CXorf49A8MYA2 514 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 ADCY6O43306 1168 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 IGSF3O75054 1194 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 OCA2Q04671 838 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms