RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 STXBP5LQ9Y2K9 1186 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 GDAQ9Y2T3 454 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 UBE4BO95155 1302 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 EPOPA6NHQ4 379 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.211e-9■■■■□ 22
RNF4-210ENST00000508235 NR1I2O75469 434 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 POMCP01189 267 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 HARSP12081 509 aaKnown RBP16.39■□□□□ 0.21
RNF4-210ENST00000508235 POU3F3P20264 500 aaPredicted RBP16.39■□□□□ 0.21
RNF4-210ENST00000508235 IGFBP4P22692 258 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 CASP1P29466 404 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 CASP5P51878 434 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 UBE2HP62256 183 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 KRT17Q04695 432 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 UBE3AQ05086 875 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 EHHADHQ08426 723 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 ENGASEQ8NFI3 743 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
RNF4-210ENST00000508235 GBP4Q96PP9 640 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 SPG21Q9NZD8 308 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 KLK14Q9P0G3 267 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 LAMA3Q16787 3333 aa16.39■□□□□ 0.21
RNF4-210ENST00000508235 A0A0B4J269 797 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 RFXAPO00287 272 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 OGTO15294 1046 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
RNF4-210ENST00000508235 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
RNF4-210ENST00000508235 ALDH2P05091 517 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 THP07101 528 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 CLTAP09496 248 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 SCNN1GP51170 649 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 BCAR1P56945 870 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 OSTNP61366 133 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
RNF4-210ENST00000508235 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 GBP3Q9H0R5 595 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 PLEKHA5Q9HAU0 1116 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 HCSTQ9UBK5 93 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 STK39Q9UEW8 545 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 PUF60Q9UHX1 559 aaKnown RBP16.38■□□□□ 0.21
RNF4-210ENST00000508235 STYXL1Q9Y6J8 313 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 TRIP11Q15643 1979 aa16.38■□□□□ 0.21
RNF4-210ENST00000508235 PLXNA4Q9HCM2 1894 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 KLRC4O43908 158 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 LPXNO60711 386 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 FGF18O76093 207 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 PRPF6O94906 941 aaKnown RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 KIF20AO95235 890 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 AFF1P51825 1210 aaKnown RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 PLCB3Q01970 1234 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 DPYDQ12882 1025 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 ELOA2Q8IYF1 753 aaPredicted RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 GSTCDQ8NEC7 633 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 ZNF507Q8TCN5 953 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 MRPL38Q96DV4 380 aaKnown RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 SLC38A7Q9NVC3 462 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 LZTS1Q9Y250 596 aa16.37■□□□□ 0.21
RNF4-210ENST00000508235 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
RNF4-210ENST00000508235 PDCD11Q14690 1871 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 KIAA0391O15091 583 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 DDHD2O94830 711 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 ITGB1P05556 798 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 GALTP07902 379 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 GARTP22102 1010 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 POU5F1Q01860 360 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 DSC1Q08554 894 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 KCNA1Q09470 495 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 TUSC3Q13454 348 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 ADGRE1Q14246 886 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 KCNB1Q14721 858 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 XKR4Q5GH76 650 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 PDE12Q6L8Q7 609 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 SLC39A4Q6P5W5 647 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 CD302Q8IX05 232 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 COLGALT2Q8IYK4 626 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 SLC39A11Q8N1S5 342 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 CEP120Q8N960 986 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 TMEM169Q96HH4 297 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 SNX27Q96L92 541 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 FGFBP2Q9BYJ0 223 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 RPF1Q9H9Y2 349 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 MIOSQ9NXC5 875 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms