RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CMPK2Q5EBM0 449 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARSHQ5FYA8 562 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPDYAQ5MJ70 313 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 TBC1D9BQ66K14 1250 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 RNF43Q68DV7 783 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC137Q6PK04 289 aaKnown RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZDHHC24Q6UX98 284 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 INTS8Q75QN2 995 aaKnown RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SH3BP5LQ7L8J4 393 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZBTB33Q86T24 672 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 TBC1D1Q86TI0 1168 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM228AQ86W67 206 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CATSPER3Q86XQ3 398 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC9A9Q8IVB4 645 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 GLYCTKQ8IVS8 523 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 LMNTD2Q8IXW0 634 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC105Q8IYK2 499 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANKRD35Q8N283 1001 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 AGGF1Q8N302 714 aaeCLIP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 LNX1Q8TBB1 728 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 TBC1D16Q8TBP0 767 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 FBXO25Q8TCJ0 367 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 FBXO41Q8TF61 875 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 NSMCE1Q8WV22 266 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CKAP2Q8WWK9 683 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ART4Q93070 314 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CNKSR1Q969H4 720 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 TBC1D31Q96DN5 1066 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM81BQ96LP2 452 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 REEP2Q9BRK0 252 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGAP9Q9BRR9 750 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SYT11Q9BT88 431 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 AMNQ9BXJ7 453 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC113Q9H0I3 377 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CPVLQ9H3G5 476 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRRC19Q9H756 370 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 POLD4Q9HCU8 107 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 UBN1Q9NPG3 1134 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SEPT11Q9NVA2 429 aaKnown RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 GMPR2Q9P2T1 348 aaKnown RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 UVRAGQ9P2Y5 699 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 APEX2Q9UBZ4 518 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 PPP1R9AQ9ULJ8 1098 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 CORO1CQ9ULV4 474 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 SNX24Q9Y343 169 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 PCDHA1Q9Y5I3 950 aa5.32□□□□□ -1.56
HMGB3P16-201ENST00000508037 MYH4Q9Y623 1939 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPATA31A1Q5TZJ5 1347 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RPTORQ8N122 1335 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 NPHP3-ACAD11A0A0J9YXS1 232 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMEM120BA0PK00 339 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SMIM23A6NLE4 172 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 DCDC2CA8MYV0 355 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TCP11X1B4DZS4 312 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 IGF2BP3O00425 579 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MAPK13O15264 365 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PMM2O15305 246 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPOPO43791 374 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 EDIL3O43854 480 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MED24O75448 989 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 DCTN3O75935 186 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 UBOX5O94941 541 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SHBGP04278 402 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 CYP3A4P08684 503 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RARAP10276 462 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MAPTP10636 758 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ABCB4P21439 1286 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SCP2P22307 547 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 STX2P32856 288 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 CIITAP33076 1130 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF76P36508 570 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SREBF1P36956 1147 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MSH2P43246 934 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RPL21P46778 160 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC18A1P54219 525 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RHBDL3P58872 404 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 NCALDP61601 193 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 IFI35P80217 286 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 GABPAQ06546 454 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPIRE1Q08AE8 756 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PABPC4Q13310 644 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 CTTNQ14247 550 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 STAT4Q14765 748 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PARP6Q2NL67 630 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TSNAXIP1Q2TAA8 658 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PRR16Q569H4 304 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 DCAF12L1Q5VU92 463 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PPP1R2P3Q6NXS1 205 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 DPP8Q6V1X1 898 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MIGA2Q7L4E1 593 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 VASH1Q7L8A9 365 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC13A5Q86YT5 568 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SYCP3Q8IZU3 236 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRRC47Q8N1G4 583 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms