RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TCEANC2Q96MN5 208 aa15.5■□□□□ 0.07
DDR1-260ENST00000507533 CHRDQ9H2X0 955 aa15.5■□□□□ 0.07
DDR1-260ENST00000507533 HCFC1R1Q9NWW0 138 aa15.5■□□□□ 0.07
DDR1-260ENST00000507533 KCNH3Q9ULD8 1083 aa15.5■□□□□ 0.07
DDR1-260ENST00000507533 GIT1Q9Y2X7 761 aa15.5■□□□□ 0.07
DDR1-260ENST00000507533 KLF18A0A0U1RQI7 1052 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 AXLP30530 894 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 NPEPPSP55786 919 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 PSMC5P62195 406 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 NECTIN1Q15223 517 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 PABPC1LQ4VXU2 614 aaKnown RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 IL31Q6EBC2 164 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 NOTUMQ6P988 496 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 ZNF687Q8N1G0 1237 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 ZNF579Q8NAF0 562 aaKnown RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 SLC7A14Q8TBB6 771 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 MCRS1Q96EZ8 462 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 CPB2Q96IY4 423 aa15.49■□□□□ 0.07
DDR1-260ENST00000507533 DNMT3BQ9UBC3 853 aaKnown RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 MRPS23Q9Y3D9 190 aaKnown RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 MTCL1Q9Y4B5 1905 aaKnown RBP15.49■□□□□ 0.07
DDR1-260ENST00000507533 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.073e-6■■■■■ 137.9
DDR1-260ENST00000507533 MAN2B1O00754 1011 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 FOXD2O60548 495 aaPredicted RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 TSPAN1O60635 241 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 CCR3P51677 355 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 SHC2P98077 582 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 EXOSC10Q01780 885 aaKnown RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 NCBP1Q09161 790 aaKnown RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 PSMD5Q16401 504 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 CEP57Q86XR8 500 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 EXOC8Q8IYI6 725 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 RNF149Q8NC42 400 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 GSTCDQ8NEC7 633 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 LNX1Q8TBB1 728 aaPredicted RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 PIK3R5Q8WYR1 880 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 DNASE1L2Q92874 299 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 CEP170P1Q96L14 293 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 IER2Q9BTL4 223 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 TTPALQ9BTX7 342 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 TRIM6Q9C030 488 aaPredicted RBP15.48■□□□□ 0.07
DDR1-260ENST00000507533 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 LMAN1LQ9HAT1 526 aa15.48■□□□□ 0.07
DDR1-260ENST00000507533 ASAP2O43150 1006 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 ADAM12O43184 909 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 HRO43593 1189 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 POU2F2P09086 479 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 AKAP5P24588 427 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 UVSSAQ2YD98 709 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 Q4G0T1 1027 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 AXDND1Q5T1B0 1012 aaPredicted RBP15.47■□□□□ 0.07
DDR1-260ENST00000507533 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 TANGO2Q6ICL3 276 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 HASPINQ8TF76 798 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 NXF3Q9H4D5 531 aaKnown RBP15.47■□□□□ 0.07
DDR1-260ENST00000507533 DHX33Q9H6R0 707 aaKnown RBP15.47■□□□□ 0.07
DDR1-260ENST00000507533 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
DDR1-260ENST00000507533 GDE1Q9NZC3 331 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 CACNG4Q9UBN1 327 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 WDR81Q562E7 1941 aa15.47■□□□□ 0.07
DDR1-260ENST00000507533 PROS1P07225 676 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 HOXB3P14651 431 aaPredicted RBP15.46■□□□□ 0.07
DDR1-260ENST00000507533 RFC5P40937 340 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 CXCL12P48061 93 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 SATB1Q01826 763 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 GRIK3Q13003 919 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 PCBP1Q15365 356 aaKnown RBP eCLIP15.46■□□□□ 0.07
DDR1-260ENST00000507533 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
DDR1-260ENST00000507533 FERMT3Q86UX7 667 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 TBCKQ8TEA7 893 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 TCP11Q8WWU5 503 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 ELSPBP1Q96BH3 223 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 PAAF1Q9BRP4 392 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 BRD9Q9H8M2 597 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 KLK14Q9P0G3 267 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 PPME1Q9Y570 386 aa15.46■□□□□ 0.07
DDR1-260ENST00000507533 FRYQ5TBA9 3013 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 DOCK6Q96HP0 2047 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 CCDC196A0A1B0GTZ2 297 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 CHURC1-FNTBB4DL54 471 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 INO80B-WBP1J3KQ70 363 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
DDR1-260ENST00000507533 TDP2O95551 362 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 QARSP47897 775 aaKnown RBP15.45■□□□□ 0.06
DDR1-260ENST00000507533 FNTBP49356 437 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 RCAN1P53805 252 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 SRSF5Q13243 272 aaKnown RBP15.45■□□□□ 0.06
DDR1-260ENST00000507533 GRM2Q14416 872 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 ACAP1Q15027 740 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 AASDHQ4L235 1098 aaPredicted RBP15.45■□□□□ 0.06
DDR1-260ENST00000507533 POTEHQ6S545 545 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 CCDC148Q8NFR7 591 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 FAM3CQ92520 227 aa15.45■□□□□ 0.06
DDR1-260ENST00000507533 PARP2Q9UGN5 583 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms